Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2115 ATGTCCAGTACAGAAATGACATCAGATTTCTTAAGATTTGGCTCCTATATATGGATGCTAGTGAGGATTTTAGCAATGTGTTCAAAGAAATGCTGGATAGTAATGTATGTGCCAATCATTCTTCACTTTATGTATGGTCTGCATATTTTTTTGAATCCAAAGGGAGATTGCATGACGCTCACACACTCTATCAGCTCGGCATTTCCAGAACCAATTGAGTGGTTGAAGACAGCGCATAAATTGTTCCTCAATAGAATTTCTGAAATAGCGACTGTTGCTTCTCGTCAGAAGATTGATGATAACGAATCCATGAAATTTGAAAATGGCGCAATTAATCCATGGAGCTCCTCAATCATGGATGATATATTGAAGAGGATAAATGCTTTGATTACAAAATTTGATGGGTATCATTCAAGTAACAAAGCTTATGCCGGAAAAGTTGCCTTATCTTCTTTGAAGAATTCATCAAGGAATAAAATTGTAGAGATAGGTGGAAAGAAGTATCAAATCAAGGGTTGCGCCGGACAAGGCGGTTTCGCTCAAGTATACAAGGCATATGTTAATAGTAATCCCGATGAAGTTGTCGCGCTGAAGATCCAAAAGCCACCTTTCCCATGGGAATTTTACATCTACCGTCTGCTTGATCAACGTATCTTAGAGAGTGAAAGACCAAGCTATGGCTTTGCTCATAGAATTCATATCTATTCTGATTGTAGCATACTCATCTGTGACTATTTAGCTCATGGGACACTACAGGATGTCATAAATTCATATGTGGTCATGGGCAAATCCATGGAAGAAGTGCTGTGCATTTACTACGCCATAGAAATGCTACATTTGCTTGAGAAATTGCATGATGTTGGCATAATTCATGGTGATTTCAAGCCAGATAACCTGCTTATTCGGTATGCTAGTGGTGACCTTAAAGAAGACGAATTTTTGAACAGAAATGGTCCTTGGCGTGATCAGGGCCTTTGCCTTGTAGACTGGGGAAGAGGGATTGATCTGTGTCTCTTTGCGGATCACGCGGTATTCAATGGAGACTGCAGAACTTCTGGCTTTCGTTGCATTGAGATGCAAGAGAGCAGGCCATGGAAATTTCAGGTAGACACATATGGTCTTTGTGTTGTTGTCCACATGATGTTGCATAATACTTACATGGAGATTGTCAAAAAGGAATCATCTGATGGGAGCCACGTTTATCTACCCAGGCTTCCGTTTAAACGTTACTGGAACGTTGAGCTGTGGAAGACTTTCTTTACTAAGATGTTGAACCAATGCAATGGCAATGATCATAGAAGTCTGCTGCAGGAGTTGAGAAAGTCCTTCGAAGACTATATGGGCTCCAATCCGAAGCTTATAAAGAAACTAAAGGAGTTGCTTGTGAAGCAAAGGGCTTCCTTGTGTTCTGCTTAG 1416 0.404 MSSTEMTSDFLRFGSYIWMLVRILAMCSKKCWIVMYVPIILHFMYGLHIFLNPKGDCMTLTHSISSAFPEPIEWLKTAHKLFLNRISEIATVASRQKIDDNESMKFENGAINPWSSSIMDDILKRINALITKFDGYHSSNKAYAGKVALSSLKNSSRNKIVEIGGKKYQIKGCAGQGGFAQVYKAYVNSNPDEVVALKIQKPPFPWEFYIYRLLDQRILESERPSYGFAHRIHIYSDCSILICDYLAHGTLQDVINSYVVMGKSMEEVLCIYYAIEMLHLLEKLHDVGIIHGDFKPDNLLIRYASGDLKEDEFLNRNGPWRDQGLCLVDWGRGIDLCLFADHAVFNGDCRTSGFRCIEMQESRPWKFQVDTYGLCVVVHMMLHNTYMEIVKKESSDGSHVYLPRLPFKRYWNVELWKTFFTKMLNQCNGNDHRSLLQELRKSFEDYMGSNPKLIKKLKELLVKQRASLCSA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2115 471 SUPERFAMILY Protein kinase-like (PK-like) 165 424 IPR011009 -
Prci7g2115 471 Pfam Protein kinase domain 170 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2115 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Prci7g2115 471 Gene3D Transferase(Phosphotransferase) domain 1 165 468 - -
Prci7g2115 471 SMART serkin_6 168 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2115 471 ProSiteProfiles Protein kinase domain profile. 168 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2115 471 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 107 465 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2115 Prci-Chr7 34998825 35003716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2115 175 358 MAP Kinase Kinase Gene Family AT1G32320 27.368 8.93e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Prci7g2115 Pkinase 2.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2115 K02178 - gmx:100783171 660.603