Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2112 ATGGATGAGATTAAAGCAGAGACGGTGGTGAAGAGGGAGGCCTTGGGGGATTACGATCACGAGGAGAAAAATGGATTCTTGTTGGGGGAAGAAGACCAGAGGAAGAAAGTGTCCGTGAAGAAAGGGTCTGCTGGCGGCGGCGGAGGGAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCTTGGCGGAGCTCAGTGGTGCGAAGCCGTATCACAAGAGGCACAAGGTGTGCGAGTATCATGCCAAGGCTCAGGAAGTAATCGTGTGCGGCATCCGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTGGGTGAGTTTGATGAGACGAAAAGGAGTTGCAGGAGGCGTTTGGCTGGGCACAACGAACGACGAAGGAAGAGCTCAGTGTGTGAGACTCAGGCAGAAGGGTCGAGCCAGAAAAGAACAGGGATGACTCAGCTGAAGGACATGGTTTGTGGTGACGATAGAGGCAGAATTCAGATCAGTATATAA 498 0.5241 MDEIKAETVVKREALGDYDHEEKNGFLLGEEDQRKKVSVKKGSAGGGGGSGMRCCQAENCLAELSGAKPYHKRHKVCEYHAKAQEVIVCGIRQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVCETQAEGSSQKRTGMTQLKDMVCGDDRGRIQISI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2112 165 Gene3D - 45 116 IPR036893 GO:0003677|GO:0005634
Prci7g2112 165 SUPERFAMILY SBT domain 53 131 IPR036893 GO:0003677|GO:0005634
Prci7g2112 165 Pfam SBP domain 55 128 IPR004333 GO:0003677
Prci7g2112 165 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 134 IPR044817 GO:0003677
Prci7g2112 165 ProSiteProfiles Zinc finger SBP-type profile. 52 129 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2112 Prci-Chr7 34995104 34996822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2112 34 142 SBP-box Gene Family AT1G53160 60.550 3.73e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci7g2112 SBP 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2112 - - jre:108986645 196.052