Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2111 ATGGATGAGATTAAAGCAGAGACGGTGGTGAAGAGGGAGGCCTTGGGGGATTACGATCACGAGGAGAAAAATGGATTCTTGTTGGGGGAAGAAGACCAGAGGAAGAAAGTGTCCGTGAAGAAAGGGTCTGCTGGCGGCGGCGGAGGGAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCTTGGCGGAGCTCAGTGGTGCGAAGCCGTATCACAAGAGGCACAAGGTGTGCGAGTATCATGCCAAGGCTCAGGAAGTAATCGTGTGCGGCATCCGACAACGTTTTTGTCAGCAATGCAGCAGGTTCGGGGAGTTTCGGCTTTTGGTTGGATTCCATGAGTTGGGTGAGTTTGATGAGACGAAAAGGAGTTGCAGGAGGCGTTTGGCTGGGCACAACGAACGACGAAGGAAGAGCTCAGTGTGTGAGACTCAGGCAGAAGGGTCGAGCCAGAAAAGAACAGGGATGACTCAGCTGAAGGACATGGTTTGTGGTGACGATAGAGGCAGAATTCAGATCAGTATATAA 525 0.5257 MDEIKAETVVKREALGDYDHEEKNGFLLGEEDQRKKVSVKKGSAGGGGGSGMRCCQAENCLAELSGAKPYHKRHKVCEYHAKAQEVIVCGIRQRFCQQCSRFGEFRLLVGFHELGEFDETKRSCRRRLAGHNERRRKSSVCETQAEGSSQKRTGMTQLKDMVCGDDRGRIQISI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2111 174 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 143 IPR044817 GO:0003677
Prci7g2111 174 ProSiteProfiles Zinc finger SBP-type profile. 52 138 IPR004333 GO:0003677
Prci7g2111 174 Gene3D - 45 125 IPR036893 GO:0003677|GO:0005634
Prci7g2111 174 Pfam SBP domain 55 137 IPR004333 GO:0003677
Prci7g2111 174 SUPERFAMILY SBT domain 53 140 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2111 Prci-Chr7 34995104 34996825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2111 34 151 SBP-box Gene Family AT1G53160 55.932 7.00e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci7g2111 SBP 2.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2111 - - jre:108986645 188.348