Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2096 ATGCTCTCTGTGTCACCTCTTGGAAGCACGAAAGATGAAGAGGGGCAGGGAGAGATGGAGAGGCTCTCGATGGAGTCCCACGTGTTCGGTGACCTCTCCGATGGGAATTTATTGGAAAGCATCAGCTTCGACGATATATTTGTCGGTATCAACGACGGAGATGTCTTGCCGGATTTGGAGATGGACCCCGAGATCTTCGCCGACTTTTCCCTCAGCACCGGCGAGGACTCGGAGATGGCCACGTCATCGCTCTCGGTGGAAAACTTTAAAGTTGACCAGAATATAGCTACGTCGACAAAGAAAGAAGAGGAAGATAAAGTGTCCTCGGATTCGGGCTCCGGTTCGGGGTCGAACTCCGGAGATGAGATAGTGAGCCGAAGGGATGAATCCGTGGCGGTTAAGCCGTCGCAGAGTGAAGTTGATAAGGGAAGAAAATCATCAGCCGAGTCGAAGAATTCTCGAGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAACTAGGAGTGGATAAGGCGGTGCCTTCGAGAATTTTGGAGATTATGGGAATAGATTGTCTCACTCGCCATAACATAGCCAGCCATCTTCAAAAATATCGATCCCACAGGAAACATCTGTTGGCACGTGAAGCAGAAGCAGCGAACTGGAATAAAAGAAGACAGTGTTACGGTATAGGAGGAGGAGGAGGAGGAGGCAAGAGGGAGGGAAGCCCTTGGCTGGCAGTAGCACCGACCATGGGTTTTCCTCCGGTGACGCCGCCGCCGCCAATGCAGCATTTCGGAGCCTTACATGTGTGGGGCCATCCCACCATGGACCACTCCTTCATGCCCTTGTGGCCTAAGCATCTCCCTCCTCACTCCCCCTCGCCGCCGCCCCCCCTCGCTTGGGCTTCGCCCGCCCCTCCGCCTCCTGATCCTTCCTACTGGCACCAACCGGCTACCAATGCACTAACGCCGGGAACACCTTGCTTTCCACAGCCTCTGACTACGGCGAGATTTCCCTCTCCACCTGTCCCGGGTATCCCACCCCTTGTAATGTACAAGGTAGATCCTGGCATCGCCGTCCCCACCGGCCAACCCGCTCCTCGCCCACTCATTGATTTTCATCCTTCAAAGGAGAGCGTAGATGCAGCTATTGGAGATGTTTTATCAAAGCCGTGGCTGCCACTTCCTCTTGGGCTTAAAGCTCCAGCGCTTGACAGTGTGATGGGTGAATTGCAGAGACAAGGAATTCCAAAAATTCCACCCTCCTGTGCTTGA 1290 0.5395 MLSVSPLGSTKDEEGQGEMERLSMESHVFGDLSDGNLLESISFDDIFVGINDGDVLPDLEMDPEIFADFSLSTGEDSEMATSSLSVENFKVDQNIATSTKKEEEDKVSSDSGSGSGSNSGDEIVSRRDESVAVKPSQSEVDKGRKSSAESKNSRGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWNKRRQCYGIGGGGGGGKREGSPWLAVAPTMGFPPVTPPPPMQHFGALHVWGHPTMDHSFMPLWPKHLPPHSPSPPPPLAWASPAPPPPDPSYWHQPATNALTPGTPCFPQPLTTARFPSPPVPGIPPLVMYKVDPGIAVPTGQPAPRPLIDFHPSKESVDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKIPPSCA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2096 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 214 IPR017930 -
Prci7g2096 429 FunFam Two-component response regulator 154 217 - -
Prci7g2096 429 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 428 IPR044825 GO:0003700|GO:0045893
Prci7g2096 429 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g2096 429 Gene3D - 155 216 - -
Prci7g2096 429 MobiDBLite consensus disorder prediction 296 321 - -
Prci7g2096 429 Pfam Myb-like DNA-binding domain 161 210 IPR001005 -
Prci7g2096 429 SUPERFAMILY Homeodomain-like 156 215 IPR009057 -
Prci7g2096 429 MobiDBLite consensus disorder prediction 95 161 - -
Prci7g2096 429 MobiDBLite consensus disorder prediction 296 319 - -
Prci7g2096 429 MobiDBLite consensus disorder prediction 122 161 - -
Prci7g2096 429 NCBIfam myb-like DNA-binding domain, SHAQKYF class 158 212 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2096 Prci-Chr7 34925145 34928888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2096 1 380 G2-like Transcription Factor Family AT5G44190 39.494 1.09e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci7g2096 Myb_DNA-binding 5.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2096 - - cave:132183136 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2096 7 34925145 34928888 Prci7g2096 7 34925145 34928888 ECH