Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2092 ATGCTTCTGCAACAAAAGATGGATGATGTAGAAATTTCAAGTGGTTTCCGTCATCCGAATCCAACTGATCATCTTGCATCTTCTAATAATAACCCTCCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAATCCAGATCCTGAGGCAGAGGTCATAGCCTTATCGCCGAAGACTTTGATGGCCACCAACAGATTCTTGTGCGAAATCTGTGGGAAAGGTTTCCAACGGGATCAAAATCTTCAGCTGCATCGAAGAGGACACAATCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAACCAAGGAAGAGAGTGTATGTTTGCCCTGAGAAGACGTGTGTCCACCACGACCCTTCAAGGGCACTGGGAGACTTAACAGGGATAAAGAAGCACTTTTGCAGAAAGCATGGTGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGATATGCTGTCCAGTCAGACTGGAAAGCCCACTCTAAGACCTGCGGCACCAGAGAATACAAATGTGATTGCGGGACTATCTTTTCACGGAGAGACAGTTTCATAACCCACAGGGCATTCTGCGACGCCTTGGCAGAAGAGACAGCAAGAGTTAATGCAGAATCTACAGTGAACAACTCTCTGCTGGGTTACAACATCATGGGAAATTCCCAAGGGCATGGCATGACCCCACATTTTCCTTCAATTTTCCAGCCAATCTCAAACACAGTTGCCGAAACAAATCATCAAGCACCCATGGGGCTATCTCTATGGATGGGTCCGACCCGAACTCAAGGCCCTCGAGCTCATGACACAGTAGCCAATAATTTGAGCAGTAATATCAATAAACCGTTTGAGATTCATCAACTCGGGTCAGTCATCACTAGCTCATCATCATCAGGATCAATACTATACGGGAACAACCCGCTTGTTTCATGGTCAAATCCTCAGCCGAATTGGGTGTTTGGGAGTAATAACAAGAACGTTAGTCATCATCAAGATCAGCTGATCAGCGTTCCTTCCCTGTACAGCTCCCAACATCAGCAATCCCGTCAAACATCGTCGGCAAACATGTCGGCCACGGCTTTGTTGCAGAAAGCCACCCAAATAGGGGCAACTTCAACCGACACGTCATTCCTGGGAACCTTAGGGTTGAAATGCAGCAGCAATCAAGAAAAGGATGGGAACAAATTCTGCGGACTGTACGGTTCAGGTTCAGTAACGGTGAGTACCCTGGGAAGCGAGACAGAGAACCCAGCAAAACGCAGGAAAAGACAGCAGAATGAAGAGAATAAGGGGGGAGAGCAAACGAGGGATTTTCTGGGCGTGGGCGTAGTCCATTTGCCATCCAGCTCCAATGAACGGATGGATTTGAAGCATAAGACGGGACGACAGAACATTTTGAAAATGGACTTAAATGAAACACTAAATACGATGATGCACATCTAA 1431 0.4682 MLLQQKMDDVEISSGFRHPNPTDHLASSNNNPPVLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAESTVNNSLLGYNIMGNSQGHGMTPHFPSIFQPISNTVAETNHQAPMGLSLWMGPTRTQGPRAHDTVANNLSSNINKPFEIHQLGSVITSSSSSGSILYGNNPLVSWSNPQPNWVFGSNNKNVSHHQDQLISVPSLYSSQHQQSRQTSSANMSATALLQKATQIGATSTDTSFLGTLGLKCSSNQEKDGNKFCGLYGSGSVTVSTLGSETENPAKRRKRQQNEENKGGEQTRDFLGVGVEXHLPSSSNERMDLKHKTGRQNILKMDLNETLNTMMHI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2092 477 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 28 450 IPR031140 -
Prci7g2092 477 MobiDBLite consensus disorder prediction 318 351 - -
Prci7g2092 477 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Prci7g2092 477 MobiDBLite consensus disorder prediction 411 430 - -
Prci7g2092 477 FunFam protein indeterminate-domain 12-like 44 112 - -
Prci7g2092 477 Gene3D Classic Zinc Finger 61 88 - -
Prci7g2092 477 Gene3D Classic Zinc Finger 99 189 - -
Prci7g2092 477 MobiDBLite consensus disorder prediction 20 35 - -
Prci7g2092 477 SUPERFAMILY beta-beta-alpha zinc fingers 64 161 IPR036236 -
Prci7g2092 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 87 IPR013087 -
Prci7g2092 477 FunFam protein indeterminate-domain 5, chloroplastic-like 119 198 - -
Prci7g2092 477 MobiDBLite consensus disorder prediction 404 432 - -
Prci7g2092 477 MobiDBLite consensus disorder prediction 7 47 - -
Prci7g2092 477 SMART c2h2final6 141 161 IPR013087 -
Prci7g2092 477 SMART c2h2final6 106 136 IPR013087 -
Prci7g2092 477 SMART c2h2final6 65 87 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2092 Prci-Chr7 34880071 34882850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2092 31 447 IDZ Gene Family AT1G03840 50.840 2.15e-133 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g2092 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2092 K25870 - pvy:116113287 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2092 7 34880071 34882850 Prci7g2092 7 34880071 34882850 ECH