Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2070 ATGGAACTCACAGAAAGGAGCAAAATAATGGAAGGTTTTGACTGGAGCTCGGGCATTTGTGGGAATGCCTCACAGAGAACCAGTCTTGGTTTTACTGCTAATTCTGGCGTTATAGAAAGTGGATTTACTTCATCTTCTTCTCTGGTTTTGGATAACCAGATAGGTGAGCTCGTGGAGGCTTCTGTCAGAGAACGAAACAAGGGCTTGCCCTCTGAGAGAAGCATCGAAGCTTTGAAGAACCATAGCGAGGCAGAACGCAGGAGAAGAGCAAGGATCAATGCTCATCTTGATACTCTTCGCACCGTAATTCCAGGTGCTAACAAGATGGACAAAGCATCATTACTGGCTGAGGTGATCAGGCATTTGAAAGAGCTGAAAGGGAATGCAGAACAGGCTTGTGAAGGCTTAATGATACCAAAGGACAGTGATGAGATTAGAGTTGAAGAACAAGAGGAAGGTTCCAATGGTTTTCCTTATTCAATTAAGGCATCTCTGTGTTGTGAATATAAACCTGGGCTACTGTCTGATATAAGACAAGCACTTGATGCTCTTCATCTTATGATAATGAGGGCAGAAATTGCAACCTTGGGAGGGAGGATGAAGAACGTGTTTGTGATAATAAGCTGCAAAGAGCACAACGTTGAAGATTCTGAGTACCGTCAGTTTCTTGCTGGTTCTGTTCATCAAGCTCTCAAGTCCGTGGTTGATAGATTCTCTGCTTCACAGGACCTCGTGGGAATCAGAAAGAGAAGGAGGATTTCTATATTCAATTCATCATCTCTGGGAGAATTCTGGTGA 798 0.4361 MELTERSKIMEGFDWSSGICGNASQRTSLGFTANSGVIESGFTSSSSLVLDNQIGELVEASVRERNKGLPSERSIEALKNHSEAERRRRARINAHLDTLRTVIPGANKMDKASLLAEVIRHLKELKGNAEQACEGLMIPKDSDEIRVEEQEEGSNGFPYSIKASLCCEYKPGLLSDIRQALDALHLMIMRAEIATLGGRMKNVFVIISCKEHNVEDSEYRQFLAGSVHQALKSVVDRFSASQDLVGIRKRRRISIFNSSSLGEFW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2070 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 130 IPR036638 GO:0046983
Prci7g2070 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
Prci7g2070 265 Pfam Helix-loop-helix DNA-binding domain 80 125 IPR011598 GO:0046983
Prci7g2070 265 Gene3D - 72 133 IPR036638 GO:0046983
Prci7g2070 265 PANTHER TRANSCRIPTION FACTOR BHLH30 42 259 IPR045847 GO:0003700|GO:0006355
Prci7g2070 265 SMART finulus 82 131 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2070 Prci-Chr7 34716906 34718430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2070 73 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 42.051 1.10e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g2070 HLH 4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2070 - - gmx:100783322 366.311