Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2054 ATGGCCGAGAACATACACTGCATATCTGACGACGACAAGAGCGACCGTACTGATTTGGAAGCCAGACCTAAGAAACATTCATTCTTGGATCTGAATGAAGAAGCCGTGGTTGACGATGGAGAGACCAGCATCATTGATGATAGATCGTCTCCAGAAGGGAATTCGAGCAGTAACAACTCAAGCACAGATCAACTGAGAGAACGAACAACGAGTGTTAGGCACTACGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTGGCTTTTGTACTTGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACTCCCAAGTTGGTTCTTCAGCTCATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTCTTATCTCAAAATAGGGGAATGCATCATGGAAGAGGACACATTGTGGAGATGCACGAAAGATACAATAAAGCCCAAGGGGGCCACTTTGGGATAGATACCAACTATCAAGCGTCATCTGTGCTAATGAAACGTCCGTATGACTATGACTTCAAACGCGCTTCAAACCCATCAAGGCTTCAGACATGTGGGACAGTAGACAAGTATCAGTGGGCAAGATCAAGTTTAGAGTGGAGCAACAATAACACGATGGCAACCAAGAGGTCACACTTATTTGATGTAAGGGATGCAATAACAAAAAGTGGATCTATTAGATGTAGAGAATTTCTCCAAGAACAAAGATTCCATCATGGTGAAAAAGTTGGAGTTGGATCACAAGTCAGTAAGAGACTAAGGATTTCTTGGGATGACAAGTACAATAATTTAGTGGAACCTTATAATTCTCCTCTATGGAGAACCAAAGCTAGTTCTGTCCACCATAATCAACGCCAATGTAGTTCTTGTGCTCCAGTCTTTTCGCCAACTCATTGGCAATTTGATGCTAAGGTTCATGATATCAGTGAGGAGGAGCCATCGCAAGCAGGTGATCAGGTGAAAGACCAATCATCAGAGAGGTCTACAAGTTTCTTAGAGCTAAGTTTAAGGCGTGATGATTTTGGAAACGTTAGAGAGAAGAAAGTCTTAGGTTCAGAAAGCGAGCAAGAAGTTAACACGAAGCTTTCTCTTTCGCTGTTCTCTTCATCAAGGCAACGCGTGACATGA 1188 0.4318 MAENIHCISDDDKSDRTDLEARPKKHSFLDLNEEAVVDDGETSIIDDRSSPEGNSSSNNSSTDQLRERTTSVRHYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRGMHHGRGHIVEMHERYNKAQGGHFGIDTNYQASSVLMKRPYDYDFKRASNPSRLQTCGTVDKYQWARSSLEWSNNNTMATKRSHLFDVRDAITKSGSIRCREFLQEQRFHHGEKVGVGSQVSKRLRISWDDKYNNLVEPYNSPLWRTKASSVHHNQRQCSSCAPVFSPTHWQFDAKVHDISEEEPSQAGDQVKDQSSERSTSFLELSLRRDDFGNVREKKVLGSESEQEVNTKLSLSLFSSSRQRVT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2054 395 Pfam Myb-like DNA-binding domain 83 133 IPR001005 -
Prci7g2054 395 Gene3D - 80 137 - -
Prci7g2054 395 FunFam Myb family transcription factor 79 137 - -
Prci7g2054 395 MobiDBLite consensus disorder prediction 1 33 - -
Prci7g2054 395 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 136 IPR006447 GO:0003677
Prci7g2054 395 MobiDBLite consensus disorder prediction 47 66 - -
Prci7g2054 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 60 206 IPR046955 GO:0003700
Prci7g2054 395 MobiDBLite consensus disorder prediction 1 71 - -
Prci7g2054 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 137 IPR017930 -
Prci7g2054 395 MobiDBLite consensus disorder prediction 330 351 - -
Prci7g2054 395 SUPERFAMILY Homeodomain-like 79 135 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2054 Prci-Chr7 34579358 34583213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2054 69 140 G2-like Transcription Factor Family AT2G42660 77.778 5.87e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci7g2054 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2054 - - lang:109337615 278.485