Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2042 ATGCCAGCTACTGTCGTTGAGGGGAATGATGCAGTCACTGGCCACATCATATCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGACCGTAGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGCCTGATGGATCATCCCAATGTAATTTCTCTGAAGCACTGTTTCTTCTCTACAACCAGCAGAGATGAACTTTTTCTGAACTTGGTTATGGAATATGTCCCTGAGACAATGTACCGAGTTCTAAAACACTACTGTAGTATGAACCAGAGGATGCCCCTCATCTATGTTAAACTTTACACTTACCAAATTTTTAGGGGACTGGCATATATCCATACTGTACCTGGAGTTTCCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTTACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCACGATATTATCGAGCTCCCGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCTGGAGAAAACCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACTCCGACTCGTGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAGATTAAAGCTCACCCTTGGCACAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCGATTGATCTTGCTTCAAGGCTTCTCCAATATTCACCAAGTCTTCGATGTACTGCGCTGGAAGCATGTGCACACCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGGCTACCTAATGGCCGCCCACTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCTGGAGCATCACCTGAATTGATCAGCAAACTCATCCCAGAGCATGTTAGGCGGCAGAGTATTCTGGGCTTCCAGCTTCCACCTGGTACATAG 1125 0.4453 MPATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYCSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVSHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQLPPGT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2042 374 SMART serkin_6 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2042 374 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Prci7g2042 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Prci7g2042 374 CDD STKc_GSK3 29 321 IPR039192 -
Prci7g2042 374 Pfam Protein kinase domain 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2042 374 FunFam Shaggy-related protein kinase kappa 114 361 - -
Prci7g2042 374 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 3 363 - -
Prci7g2042 374 SUPERFAMILY Protein kinase-like (PK-like) 33 345 IPR011009 -
Prci7g2042 374 Gene3D Transferase(Phosphotransferase) domain 1 114 361 - -
Prci7g2042 374 FunFam Glycogen synthase kinase-3 beta 18 113 - -
Prci7g2042 374 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Prci7g2042 374 ProSiteProfiles Protein kinase domain profile. 34 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2042 Prci-Chr7 34536681 34542290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2042 38 356 MAP Kinase Gene Family AT3G59790 35.329 1.43e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci7g2042 Pkinase 8.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2042 K14502 - qsu:111995841 729.554