Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2041 ATGGCCTCCATGCCCTTGGGGCCGCACCACCGTCAACCACCGCCTGCGGCAGCTCCACTACAACCGCCACCACAGGCACAAGCTGGAAATGATCCACTGAAGGTGGCTGTTCGCCGTGGCTCCGATAGTGAGACCGATAAGGAAATGCCAGCTACTGTCGTTGAGGGGAATGATGCAGTCACTGGCCACATCATATCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGACCGTAGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGCCTGATGGATCATCCCAATGTAATTTCTCTGAAGCACTGTTTCTTCTCTACAACCAGCAGAGATGAACTTTTTCTGAACTTGGTTATGGAATATGTCCCTGAGACAATGTACCGAGTTCTAAAACACTACTGTAGTATGAACCAGAGGATGCCCCTCATCTATGTTAAACTTTACACTTACCAAATTTTTAGGGGACTGGCATATATCCATACTGTACCTGGAGTTTCCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTTACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCACGATATTATCGAGCTCCCGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCTGGAGAAAACCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACTCCGACTCGTGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAGATTAAAGCTCACCCTTGGCACAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCGATTGATCTTGCTTCAAGGCTTCTCCAATATTCACCAAGTCTTCGATGTACTGCGCTGGAAGCATGTGCACACCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGGCTACCTAATGGCCGCCCACTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCTGGAGCATCACCTGAATTGATCAGCAAACTCATCCCAGAGCATGTTAGGCGGCAGAGTATTCTGGGCTTCCAGCTTCCACCTGGTACATAG 1269 0.4641 MASMPLGPHHRQPPPAAAPLQPPPQAQAGNDPLKVAVRRGSDSETDKEMPATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYCSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVSHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQLPPGT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2041 422 ProSitePatterns Protein kinases ATP-binding region signature. 88 112 IPR017441 GO:0005524
Prci7g2041 422 FunFam Shaggy-related protein kinase kappa 162 409 - -
Prci7g2041 422 SMART serkin_6 82 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2041 422 CDD STKc_GSK3 77 369 IPR039192 -
Prci7g2041 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Prci7g2041 422 ProSiteProfiles Protein kinase domain profile. 82 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2041 422 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 46 411 - -
Prci7g2041 422 Pfam Protein kinase domain 82 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2041 422 SUPERFAMILY Protein kinase-like (PK-like) 81 393 IPR011009 -
Prci7g2041 422 FunFam Glycogen synthase kinase-3 beta 66 161 - -
Prci7g2041 422 Gene3D Transferase(Phosphotransferase) domain 1 162 409 - -
Prci7g2041 422 Gene3D Phosphorylase Kinase; domain 1 67 161 - -
Prci7g2041 422 MobiDBLite consensus disorder prediction 8 26 - -
Prci7g2041 422 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2041 Prci-Chr7 34536681 34542634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2041 86 404 MAP Kinase Gene Family AT3G59790 35.329 7.55e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci7g2041 Pkinase 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2041 K14502 - qsa:O6P43_028926 768.074