Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2040 ATGGCCTCCATGCCCTTGGGGCCGCACCACCGTCAACCACCGCCTGCGGCAGCTCCACTACAACCGCCACCACAGGCACAAGCTGGAAATGATCCACTGAAGGTGGCTGTTCGCCGTGGCTCCGATAGTGAGACCGATAAGGAAATGCCAGCTACTGTCGTTGAGGGGAATGATGCAGTCACTGGCCACATCATATCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGACCGTAGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGCCTGATGGATCATCCCAATATTTTTAGGGGACTGGCATATATCCATACTGTACCTGGAGTTTCCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTTACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCACGATATTATCGAGCTCCCGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTAGGCCAGCCATTATTTCCTGGAGAAAACCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACTCCGACTCGTGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAGATTAAAGCTCACCCTTGGCACAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCGATTGATCTTGCTTCAAGGCTTCTCCAATATTCACCAAGTCTTCGATGTACTGCGCTGGAAGCATGTGCACACCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGGCTACCTAATGGCCGCCCACTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCTGGAGCATCACCTGAATTGATCAGCAAACTCATCCCAGAGCATGTTAGGCGGCAGAGTATTCTGGGCTTCCAGCTTCCACCTGGTACATAG 1104 0.4755 MASMPLGPHHRQPPPAAAPLQPPPQAQAGNDPLKVAVRRGSDSETDKEMPATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNIFRGLAYIHTVPGVSHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQLPPGT 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2040 367 ProSitePatterns Protein kinases ATP-binding region signature. 88 112 IPR017441 GO:0005524
Prci7g2040 367 Pfam Protein kinase domain 135 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2040 367 SUPERFAMILY Protein kinase-like (PK-like) 81 338 IPR011009 -
Prci7g2040 367 Gene3D Transferase(Phosphotransferase) domain 1 125 324 - -
Prci7g2040 367 SMART serkin_6 82 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2040 367 Gene3D Phosphorylase Kinase; domain 1 76 124 - -
Prci7g2040 367 CDD STKc_GSK3 77 314 IPR039192 -
Prci7g2040 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci7g2040 367 MobiDBLite consensus disorder prediction 8 26 - -
Prci7g2040 367 ProSiteProfiles Protein kinase domain profile. 1 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2040 367 FunFam Shaggy-related protein kinase kappa 108 354 - -
Prci7g2040 367 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 135 356 - -
Prci7g2040 367 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2040 Prci-Chr7 34536681 34542639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2040 88 349 MAP Kinase Gene Family AT2G43790 33.231 1.17e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci7g2040 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2040 K14502 - qsa:O6P43_028926 623.239