Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2036 ATGATGTCAAGATCGTATGCAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAGTTTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGAGTGTCCCTGGGATAATTTCAGAACTTGATGATGATCAGGCACATAGTGTTTCTTCTGATAATCCATCAACTGTTTCTACAGATAGGATCATCATTGTAGCTAACCGGCTTCCTTTGAAAGCAAAACACAAGCAGGACAATAAGGGGTGGAGTTTCAGTTGGAATGAAGATTCGTTGCTTCTACAGCTTAAAGACGGGTTTCATGAAGATATGGAAGTTCTTTATGTTGGGTCATTGGGGGTTGACGTTGATCCAGCTGAACAAGATGATGTGTCACAGTATTTATTGGATAAATTCAATTGTGTCCCTACTTTTCTGCCCCCTGATGTTTTGACTAAATTTTATGATGGTTTCTGCAAAAGGCAGTTATGGCCATTGTTTCATTACATGTTACCTTTTTCAACTGATAAAAACCACCGGTTTGATCGCTCTCTGTGGGAAGCCTATGTGATGGCAAATAAGATATTTTTTCAGAAGGTAGTTGAGGTAATAAACCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTATAAGAAGGCGCTTTAACAGGGTGAAAATGGGATTTTTTCTGCATAGCCCGTTTCCATCTTCAGAAATATATAGGACTCTTCCTGTCAGGGAAGAGATACTTAAAGCTTTACTAAATTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTTTTGTCCTGTTGCAGCCGCATGTTGGGGCTGGAGTATCAGTCAAAGAGGGGGTATTTAGGATTGGAATATTATGGAAGGACGATAAGTATTAAGATTATGCCTGTTGGGGTTCACATGGGTCGTATTAAAATAGTCATGAGAATGGCAGATGAAAAGTCTAAAATAAAGGAGCTGAAACAGCAATTTGAAGGGAAAACGGTCTTGCTTGGGGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGTCAACATCCTAAGTGGCAAGGCAGGGCTGTTTTGGTCCAGATAGTAAGTCCTGCCAGGGGTAATGGGATACATCTAGAGGGCATACGGGATGAAATCCAAGAAAGCTGCAGCAGGATCAACAGGATATTTGGGCGTCCTGGTTATGAACCTATTGTCTTTATAGATAGACCGGTTTCAGTTGCAGAAAAAGCTGCTTATTATAGCATTGCCGAATGTGTTGTTGTCACAGCTGTAAGAGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGAAATGTCTGGTTTTGAATCATGCACTAATTCCAATGGCTCAAAGAGCATGCTAGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGCGGGGCTATCCGTGTGAATCCGTGGAATGTTGAAGCAACTGCGGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATCATCGGTATGTTATCACTCATGATGTGGCTTATTGGTCTCGTAGTTTCTTGCATGATATGGAGAGGGCTTGCTTGGACCTTCTGAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCCCTTGATCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGTGCAGAGAGTAGGGCCATTTTGTTGGACTATGATGGCACTGTTATGCCACAGAACTCTATTAATAAGAGTCCAAGTCCAGAGGTCATCTCTATTTTGAACACACTCAGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGTAACTGGTTTACTCCCTGCAAAAAACTTGGAATTGCTGCGGAACATGGATACTTCTTGAGGTGGTCTCAGAGTGAAGAATGGGAAATTTGTGGAAAGAGCTCTGATTTTGGCTGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTATGGCAATACCGGGATGCTGACCTTGGTTTTGGATCTTCTCAGGCCAAGGAAATGTTAGATCATCTTGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCTCAGGATGTGAGCAAGGGCTTAGTTGCAGAAAAGATCTTTTCATCAATGGCTGTACAAGGGAAACGGGCTGACTTTGTACTATGCGTTGGTGATGACAGATCAGATGAAGATATGTTCGAAATAATTAGTAGTGCCGTCTCTAGAAATATTCTTTCGGCCAATTGTTCCGTATTCGCTTGCACAGTTGGACAAAAACCGAGCAAAGCTAAGTATTATTTGGATGATACGATTGAAGTCATTAGCATGCTAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAG 2541 0.4128 MMSRSYANLLDLASGNFPAMGREFKERKRLPRVMSVPGIISELDDDQAHSVSSDNPSTVSTDRIIIVANRLPLKAKHKQDNKGWSFSWNEDSLLLQLKDGFHEDMEVLYVGSLGVDVDPAEQDDVSQYLLDKFNCVPTFLPPDVLTKFYDGFCKRQLWPLFHYMLPFSTDKNHRFDRSLWEAYVMANKIFFQKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIKIVMRMADEKSKIKELKQQFEGKTVLLGVDDMDIFKGIDLKILAMEQMLSQHPKWQGRAVLVQIVSPARGNGIHLEGIRDEIQESCSRINRIFGRPGYEPIVFIDRPVSVAEKAAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMSGFESCTNSNGSKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMADGEKQLRHEKHHRYVITHDVAYWSRSFLHDMERACLDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKSAESRAILLDYDGTVMPQNSINKSPSPEVISILNTLSADSKNVVFIVSGRGRDSLSNWFTPCKKLGIAAEHGYFLRWSQSEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMAVQGKRADFVLCVGDDRSDEDMFEIISSAVSRNILSANCSVFACTVGQKPSKAKYYLDDTIEVISMLESLAEESDSA 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2036 846 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 841 IPR001830 GO:0003824|GO:0005992
Prci7g2036 846 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Prci7g2036 846 CDD HAD_TPP 593 832 - -
Prci7g2036 846 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Prci7g2036 846 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Prci7g2036 846 CDD GT20_TPS 63 545 IPR001830 GO:0003824|GO:0005992
Prci7g2036 846 SUPERFAMILY HAD-like 592 840 IPR036412 -
Prci7g2036 846 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 846 - -
Prci7g2036 846 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 548 - -
Prci7g2036 846 Gene3D - 591 696 IPR023214 -
Prci7g2036 846 Gene3D - 720 846 IPR023214 -
Prci7g2036 846 FunFam Alpha,alpha-trehalose-phosphate synthase 317 529 - -
Prci7g2036 846 NCBIfam trehalose-phosphatase 590 840 IPR003337 GO:0003824|GO:0005992
Prci7g2036 846 Gene3D Glycogen Phosphorylase B; 56 316 - -
Prci7g2036 846 NCBIfam HAD-IIB family hydrolase 594 798 IPR006379 -
Prci7g2036 846 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Prci7g2036 846 Pfam Glycosyltransferase family 20 63 545 IPR001830 GO:0003824|GO:0005992
Prci7g2036 846 Gene3D Glycogen Phosphorylase B; 317 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2036 Prci-Chr7 34513953 34519599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2036 1 846 Trehalose Biosynthesis Gene Families AT1G06410 77.541 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2036 K16055 - gmx:100800847 1523.06