Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2034 ATGAACAGAAATTCAAACAATTTCTCACCTTTACCTGGTGCTCGGCGATTTGGCGTTGCAAGAGCCTTTGATAACCATGGTGGCTACCATGAGACGCCTGCATTTTACCCATCTCTTTCTATCCAACCTACTCCTGATGACAGGATTTCAGGGGCGCAAGATCCCCCGAGGTTGATGGATGACAGAACACATTCTGGACTCAACGGCACATCCAGTTTTCCAACACAACCACATCGCAGACAACCAAATAACGGACTCAATGGCAGCATAAGAAGGGGGCTGAACCCCATGATCGGAGAGATTGTGCCGCAGTCACCACCAAGAGCAGTAGAAAATCCCAGATCAGCAGTTTTGAGCAATCTTAAGAAAGAAATATACCAGCCCCCAAAGATTTTACCAAAGAGAGTAAGTTTATGTTATAAAGACAGTGTCGTGAATGCTTTAAAAGAGAGAGAGAGGGAAAAGCATGAACGTCGCAAGAGGTGTGCGATTTGCCTGGAAGATTTTGAACCCCGAGAGGAGGTGATGCTTACACCATGCAAACATGTGTTTCATGAGGACTGTATAGTCCCATGGGTACGGAGCAAAGGTCAGTGCCCGGTTTGTAGGTTTGTGATTTGTGAGGAGACAAGGGATCACCCGTCGTCCTTCAACGACAATATGGCTATGATGAGACCCAGTTACCTACTAATTGCAGGTGAGCTTCTATCAATTTTTAGAGCCACGGGAGAAGCTCTCGAAATGGGCAATGGAACACGGTAA 762 0.4646 MNRNSNNFSPLPGARRFGVARAFDNHGGYHETPAFYPSLSIQPTPDDRISGAQDPPRLMDDRTHSGLNGTSSFPTQPHRRQPNNGLNGSIRRGLNPMIGEIVPQSPPRAVENPRSAVLSNLKKEIYQPPKILPKRVSLCYKDSVVNALKEREREKHERRKRCAICLEDFEPREEVMLTPCKHVFHEDCIVPWVRSKGQCPVCRFVICEETRDHPSSFNDNMAMMRPSYLLIAGELLSIFRATGEALEMGNGTR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2034 253 SUPERFAMILY RING/U-box 161 214 - -
Prci7g2034 253 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
Prci7g2034 253 SMART ringv_2 161 203 IPR011016 GO:0008270
Prci7g2034 253 MobiDBLite consensus disorder prediction 64 90 - -
Prci7g2034 253 MobiDBLite consensus disorder prediction 34 92 - -
Prci7g2034 253 Pfam Ring finger domain 161 203 IPR001841 -
Prci7g2034 253 FunFam RING/U-box superfamily protein 146 220 - -
Prci7g2034 253 SMART ring_2 162 202 IPR001841 -
Prci7g2034 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 219 IPR013083 -
Prci7g2034 253 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 73 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2034 Prci-Chr7 34512321 34513877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2034 112 253 C3H Transcription Factor Family AT3G58720 44.966 6.85e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2034 - - pcin:129315451 523.472