Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2033 ATGAACAGAAATTCAAACAATTTCTCACCTTTACCTGGTGCTCGGCGATTTGGCGTTGCAAGAGCCTTTGATAACCATGGTGGCTACCATGAGACGCCTGCATTTTACCCATCTCTTTCTATCCAACCTACTCCTGATGACAGGATTTCAGGGGCGCAAGATCCCCCGAGGTTGATGGATGACAGAACACATTCTGGACTCAACGGCACATCCAGTTTTCCAACACAACCACATCGCAGACAACCAAATAACGGACTCAATGGCAGCATAAGAAGGGGGCTGAACCCCATGATCGGAGAGATTGTGCCGCAGTCACCACCAAGAGCAGTAGAAAATCCCAGATCAGCAGTTTTGAGCAATCTTAAGAAAGAAATATACCAGCCCCCAAAGATTTTACCAAAGAGAGTAAGTTTATGTTATAAAGACAGTGTCGTGAATGCTTTAAAAGAGAGAGAGAGGGAAAAGCATGAACGTCGCAAGAGGTGTGCGATTTGCCTGGAAGATTTTGAACCCCGAGAGGAGGTGATGCTTACACCATGCAAACATGTGTTTCATGAGGACTGTATAGTCCCATGGGTACGGAGCAAAGGTGAGCTTCTATCAATTTTTAGAGCCACGGGAGAAGCTCTCGAAATGGGCAATGGAACACGGTAA 654 0.4618 MNRNSNNFSPLPGARRFGVARAFDNHGGYHETPAFYPSLSIQPTPDDRISGAQDPPRLMDDRTHSGLNGTSSFPTQPHRRQPNNGLNGSIRRGLNPMIGEIVPQSPPRAVENPRSAVLSNLKKEIYQPPKILPKRVSLCYKDSVVNALKEREREKHERRKRCAICLEDFEPREEVMLTPCKHVFHEDCIVPWVRSKGELLSIFRATGEALEMGNGTR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2033 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 198 IPR013083 -
Prci7g2033 217 Pfam RING-like zinc finger 162 189 IPR001841 -
Prci7g2033 217 SUPERFAMILY RING/U-box 161 197 - -
Prci7g2033 217 ProSiteProfiles Zinc finger RING-type profile. 162 192 IPR001841 -
Prci7g2033 217 SMART ring_2 162 201 IPR001841 -
Prci7g2033 217 CDD RING-H2_PA-TM-RING 162 197 - -
Prci7g2033 217 MobiDBLite consensus disorder prediction 64 90 - -
Prci7g2033 217 MobiDBLite consensus disorder prediction 34 92 - -
Prci7g2033 217 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 71 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2033 Prci-Chr7 34512313 34513877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2033 112 198 C3H Transcription Factor Family AT3G58720 47.826 6.17e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2033 - - pcin:129315451 428.713