Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci7g2021 | ATGCGTTGCTCTCGTTCCAGGACCGAGCTGTTTGGTAGGACCTTCTATTTTGGAGAGCCAAGTTTCATGTCGGATCTAGACGCTCAGATTCCAACTGCCTTTGATCCGTTTGCTGATGCAAATGCTGAGGACTCAGAGGCTGGGACAAAGGAGTACGTGCATATTCGCGTACAGCAGCGGAATGGTAGAAAAAGCCTGACCACTGTCCAGGGACTGAAGAAAGAATACAGTTATAACAAGATACTTAAAGACCTGAAGAAAGAATTCTGCTGCAATGGTACTGTTGTCCAGGACCCAGAATTAGGACAGGTTATTCAGCTTCAAGGTGATCAGCGAAAGAATGTATCCACGTTCCTTGTTCAGGCTGGAATTGTAAAGAAGGAGCAGATCAAGATTCATGGTTTTTGA | 408 | 0.4534 | MRCSRSRTELFGRTFYFGEPSFMSDLDAQIPTAFDPFADANAEDSEAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEQIKIHGF | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci7g2021 | 135 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 53 | 123 | IPR001950 | GO:0003743|GO:0006413 | |
| Prci7g2021 | 135 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 28 | 135 | - | - | |
| Prci7g2021 | 135 | NCBIfam | translation initiation factor SUI1 | 28 | 135 | IPR005874 | GO:0003743 | |
| Prci7g2021 | 135 | PIRSF | Transl_init_SUI1_Euk | 22 | 135 | IPR005874 | GO:0003743 | |
| Prci7g2021 | 135 | FunFam | Eukaryotic translation initiation factor SUI1 | 24 | 135 | - | - | |
| Prci7g2021 | 135 | CDD | eIF1_SUI1 | 51 | 134 | IPR005874 | GO:0003743 | |
| Prci7g2021 | 135 | Gene3D | - | 18 | 135 | - | - | |
| Prci7g2021 | 135 | SUPERFAMILY | eIF1-like | 21 | 135 | IPR036877 | GO:0003743|GO:0006413 | |
| Prci7g2021 | 135 | Pfam | Translation initiation factor SUI1 | 50 | 124 | IPR001950 | GO:0003743|GO:0006413 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci7g2021 | Prci-Chr7 | 34433941 | 34435733 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci7g2021 | 23 | 135 | Eukaryotic Initiation Factors Gene Family | AT4G27130 | 92.035 | 1.77e-75 | 218 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci7g2021 | K03113 | - | pcin:129312453 | 229.18 |