Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2012 ATGGAATTGGGAATAAAGCAAGGTTTTGCAAAGGGGCTGATGTTAGGAAGCCTAGGAGTTATATATATCAGCTGGGGCTTTCAGGCTTGGGTTGGAACTTATTTGATCACTGAGAAAGGAGAACAGGGTGGCCATGTATTTGTAGCCGGCTTCAACGTTCTCATGGGAGGCCTGAGTGTCTTAAGTGCACTTCCCCATTTGACTGCTATCACAGAGGCGACAGCGGCTGTCACCCGTCTCTTTGAAATGATTGATAGGTTACCAACTATAGATTCTGAAGACAAAAAGGGAAAAGCTTTGTCACATGTGAGAGGAGAAATTGAATTTCAAGACATTTACTTTTGTTACCCATCTAGGCCAGATACACCAGTCTTGCAAGGACTCAATCTTAGGATTCCAGCAGGCAAGAGAATAGGTCTTGTAGGGGGTAGTGGTTCCGGAAAGTCCACAATCATTGCATTGCTTGAGAGATTCTATGACCCTGTTGAGGGAGAAATACGCTTAGATGGCCACAAGATCAACAGACTTCAGTTAAAATGGTTGAGATCTCAACTTGGCCTAGTAAATCAAGAACCTGTTCTTTTTGCCACAACCATAAAAGATAATATACTGTTTGGAAAAGAAGGGGCATCCATGGAAAGCGTGATAACTGCAGCTAAAGCAGCAAACGCGCATGATTTCGTTGTCAAGTTACCAGATGGATATGAAACCCAAGTTGGGCAGCTCGGATTTCAATTGTCTGGTGGGCAAAAGCAACGAATTGCCATAGCAAGAGCTTTACTCAGGGATCCAAAGGTTCTGCTGCTTGACGAAGCTACCAGTGCACTAGACGCACAATCTGAAAGAGTGGTGCAAGCAGCAATTGATCAAGCTTCAAAAGGAAGGACTGCAATCATTATTGCTCACCGTCTGACTACAATACAATCTGCTCACATTATTGCAGTTCTTCAAGCAGGGAGACTGATAGAATCAGGTACCCATAATGAGCTCATGGAAATGAATGATGGACAAGGTGGGGAATATGCAAGGATGGTGAAGTTGCAGCAAGTGACCACACACGATGAAGATTTCAGGAATCCCAATCTTCAGACAGAGGAAAGGAATCCCCACCACAAGATAAGCATTTCACCGGGCCCAGCAAGTATCAGATCAAACACACCAAGCACTCCAGTTTTATTTCCATTTAGTCAGCCATTTTCCATGGGGACACCTTATTCCTACTCAATCCAATGTGATCCTAATGATGATAGTTATGAAGATAGCTTCAAAAGATCAACTTATCCAGCTCCTTCGCAGTGGCGTTTGCTAAAGATGAATGCACCTGAGTGGGGAAGAGTAGTGTTTGGATGCTTGGGTGCAATAGGCTCAGGAGCTGTCCAGCCAGTAAATGCATTTTTTGTGGGAACACTTATCTCTGTCTACTTTGACACTGAAACCTCAAAAATAAAGTTCAAAACTAGAGTCTTGGCACTTACTTTCCTGGGAATTGGCGTTTTTAACTTCATTACAAGTATTATTCAACACTACAATTTTGCAGTTATGGGAGAAAGACTGACTAAAAGAATACGAGAAAGATTGCTTGGAAAATTGTTGACTTTTGAGATTGGGTGGTTTGATGATGAAGAGAACACAAGTGCAGCCATTTGTGCAAGATTAGCCTCTGAAGCTAGCATGGTTCGCTCCCTTGTTGGAGATCGTTTGTCATTACTGTCTCAAGCAATTTTTGGATCTATCTTCGCTTATGGTCTTGCATTGGTGCTTACATGGAGATTATCCCTCGTGATGATTGCTGTACAGCCATTAGTCGTTGGGAGCTTTTATTCAAGAAGTGTCTTGATGAAGTCTATGGCAGAAAAAGCCCGAAAAGCTCAAAAGGAAGGAAGCCAACTTGCAAGTGAAGCTGTAATAAACCATAGAACCATAACAGCCTTCAGTTCTCAGAAAAGGATTTTGGCCCTTTTCGAATCTACATTGGTAGGTCCTCAAAAGGAGAGCGTTAGGCAATCATGGATTTCGGGCTTTGGTCTTTTTAGCTCACAATTTTTCACCACTACTGCAGCAGCTTTAGCTTACTGGTATGGCGGGAGGCTTTTGATTGAGGGGCTCATAGAACCAAAGCATCTTTTCCAAGCATTTTTCATCTTGCTCTTCACCGCATATATCATTGCAGAAGCAGGAAGCATGACTTCTGACTTATCTAAAGGAAGCAATGCAGTTCGATCAGTGTTTAGAATCTTGGACAGAAGAAGCGACATTGATCCTGAGACCACACGGGCAGTAGACATAAATAAGAAATTAAGAGGTCGAGTGGAACTTAAAAGTGTTTTCTTTGCATATCCAACCAGACCTGAGCAGATGATTTTCAAGGGTCTGTGTCTTAAAGTTGAGGCAGGGAGAACACTAGCACTAGTGGGACAAAGTGGTTCCGGTAAATCAACCGTTATTGGCCTCATTGAAAGGTTTTACGAACCATTGAAGGGAACAGTGTGCATAGACGAACAAGACATTAAGTCCTACAACTTGAGAGTTCTAAGGTCACGTATTGCCCTTGTAAGTCAGGAGCCAACCCTTTTTGCTGGAACCATTAGAGAAAACATTGCCTACGGGAAAGAAAAGGCAACTGAAGCTGAGATAAAGAAGGCTGCAACTCTAGCTAATGCCCATGAATTTATAAGTGGCATGAACGATGGGTACGACACTCATTGTGGAGAAAGAGGGGTTCAACTGTCAGGAGGCCAAAAACAAAGGATAGCCATAGCACGTGCAATGTTGAAGAATCCTGCAATTTTGCTGCTAGATGAGGCTACCAGTGCACTTGATAGTGTGTCAGAGAACTTGGTTCAAGAAGCACTAGAGAAGATGATGGTTGGCAGAACATGCATAATTGTGGCTCACAGGCTATCTACTATACAGAAATCAAACTCCATTGCTGTGATTAAGGATGGGAAAGTTGTGGAACAAGGTTCACATAATGAACTCATTTCTCTAGGGCAAGATGGAGCATACTACTCTCTTGTTAAACTTCAAAACGGTAGATCTTTTTGA 3045 0.4273 MELGIKQGFAKGLMLGSLGVIYISWGFQAWVGTYLITEKGEQGGHVFVAGFNVLMGGLSVLSALPHLTAITEATAAVTRLFEMIDRLPTIDSEDKKGKALSHVRGEIEFQDIYFCYPSRPDTPVLQGLNLRIPAGKRIGLVGGSGSGKSTIIALLERFYDPVEGEIRLDGHKINRLQLKWLRSQLGLVNQEPVLFATTIKDNILFGKEGASMESVITAAKAANAHDFVVKLPDGYETQVGQLGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQAAIDQASKGRTAIIIAHRLTTIQSAHIIAVLQAGRLIESGTHNELMEMNDGQGGEYARMVKLQQVTTHDEDFRNPNLQTEERNPHHKISISPGPASIRSNTPSTPVLFPFSQPFSMGTPYSYSIQCDPNDDSYEDSFKRSTYPAPSQWRLLKMNAPEWGRVVFGCLGAIGSGAVQPVNAFFVGTLISVYFDTETSKIKFKTRVLALTFLGIGVFNFITSIIQHYNFAVMGERLTKRIRERLLGKLLTFEIGWFDDEENTSAAICARLASEASMVRSLVGDRLSLLSQAIFGSIFAYGLALVLTWRLSLVMIAVQPLVVGSFYSRSVLMKSMAEKARKAQKEGSQLASEAVINHRTITAFSSQKRILALFESTLVGPQKESVRQSWISGFGLFSSQFFTTTAAALAYWYGGRLLIEGLIEPKHLFQAFFILLFTAYIIAEAGSMTSDLSKGSNAVRSVFRILDRRSDIDPETTRAVDINKKLRGRVELKSVFFAYPTRPEQMIFKGLCLKVEAGRTLALVGQSGSGKSTVIGLIERFYEPLKGTVCIDEQDIKSYNLRVLRSRIALVSQEPTLFAGTIRENIAYGKEKATEAEIKKAATLANAHEFISGMNDGYDTHCGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSVSENLVQEALEKMMVGRTCIIVAHRLSTIQKSNSIAVIKDGKVVEQGSHNELISLGQDGAYYSLVKLQNGRSF 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2012 1014 PANTHER ABC TRANSPORTER B FAMILY 446 1008 IPR039421 -
Prci7g2012 1014 FunFam ABC transporter B family member 4 97 355 - -
Prci7g2012 1014 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 770 1006 IPR003439 GO:0005524
Prci7g2012 1014 Gene3D - 97 349 IPR027417 -
Prci7g2012 1014 Gene3D - 759 1010 IPR027417 -
Prci7g2012 1014 CDD ABC_MTABC3_MDL1_MDL2 770 1009 - -
Prci7g2012 1014 FunFam Putative ABC transporter B family member 8 410 757 - -
Prci7g2012 1014 Pfam ABC transporter transmembrane region 447 719 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci7g2012 1014 CDD ABC_6TM_Pgp_ABCB1_D2_like 436 752 - -
Prci7g2012 1014 Gene3D ABC transporter type 1, transmembrane domain 2 366 IPR036640 GO:0005524|GO:0016020
Prci7g2012 1014 SMART AAA_5 797 990 IPR003593 GO:0016887
Prci7g2012 1014 SMART AAA_5 134 326 IPR003593 GO:0016887
Prci7g2012 1014 FunFam ABC transporter B family member 4 760 1013 - -
Prci7g2012 1014 Pfam ABC transporter 789 937 IPR003439 GO:0005524
Prci7g2012 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 348 IPR027417 -
Prci7g2012 1014 CDD ABC_MTABC3_MDL1_MDL2 107 348 - -
Prci7g2012 1014 ProSitePatterns ABC transporters family signature. 909 923 IPR017871 GO:0005524|GO:0016887
Prci7g2012 1014 Gene3D ABC transporter type 1, transmembrane domain 678 758 IPR036640 GO:0005524|GO:0016020
Prci7g2012 1014 Gene3D ABC transporter type 1, transmembrane domain 426 674 IPR036640 GO:0005524|GO:0016020
Prci7g2012 1014 SUPERFAMILY ABC transporter transmembrane region 433 748 IPR036640 GO:0005524|GO:0016020
Prci7g2012 1014 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 447 734 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci7g2012 1014 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 343 IPR003439 GO:0005524
Prci7g2012 1014 ProSitePatterns ABC transporters family signature. 246 260 IPR017871 GO:0005524|GO:0016887
Prci7g2012 1014 MobiDBLite consensus disorder prediction 359 381 - -
Prci7g2012 1014 Pfam ABC transporter 125 274 IPR003439 GO:0005524
Prci7g2012 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 765 1009 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2012 Prci-Chr7 34374774 34379926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2012 2 1009 Calmodulin-binding Proteins AT2G36910 45.054 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2012 K05658 - gmx:100788127 1655.96