Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1997 ATGCCAACAGTCTGGTTCTCTCTCAAGAGGTCTCTACACTGCAAATCAGAGCCATCAGAAGTTCATGACCCGAAATCCAGAAAGCACTTGAGCACAATCTTGACGAAAAGGGCTGGTAGGTCTGGGTGTTCGAGGAGTATAGCAAATCTCAAAGATGTGATCCATGGGAGCAAAAGGCATCTCGAGAAGCCACCGAGTTGCAGTCCGAGATCCATTGGGAGCAGCGAGTTCCTCAACCCAATTACCCACGAAGTGATTTTAAGCAACTCTAGGTGTGAGCTTAAAATCACTGGTTTTGGAGGATTTCAAGATGGCGTTGGCGGCGGAGCTAACGGCGGTGGAGGTGGAGGTGGCGGTAATAATGGCAGCGGCGGCTCTACCTTTGTGGGTACTTTAAGGCCTGGGACTCCGGGACCCGGAGGTCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACACCATCGACTCCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGGTCAGCTTTGCATGGTGGTGGTGGGCTTCATTCTAGCAATAGGATGTCTCTTGAGACTGATTCTAATGGCTGTTCCACTATCACTTGTCACAAATGTGGAGAGCAATTTACCAAATGGGAAGCTGCTGAAACTCATCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGCGATTCGTCGAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAGTCTGAGAACCACTGTGGTCGAATAGAGAGAGTGTTGAAGGTCCATAACATGCAAAAGACACTGGCTCGATTCGAAGAGTACAGAGAGATAGTGAAGATCAAAGCTAGCAAACTCCCGAAGAAACATCCTCGGTGTCTTGCCGACGGGAATGAACTTCTAAGGTTCTATGGCACCACCGTGTGCTGCAATCTTGGTCTCAATGGCTCTTCCAGCCTCTGCCTCTCAGAAAAATGCAGTGTCTGTCGAATTATCAGAAATGGGTTTTCTGCAAAGAAGGAGCTCAAGGGTGGAATAGGCGTTTTCACAACTTCCACGAGTGGAAGAGCATTTGAATCTATTGAGATCCTTGACGATGACATCTCAATCAGAAAAGCACTCATAGTTTGCAGAGTAATAGCTGGCAGGGTTCATAGGCCTCTCGAGAACATTCAGGAAATGGCAGGGCAAACAGGGTTTGATTCATTGGCCGGTAAAGTTGGTCTTTATTCAAACATAGAGGAGCTCTATTTGCTCAATCCTCGAGCTCTTCTTCCTTGCTTTGTCGTAATATGCAAACCCTGA 1305 0.4697 MPTVWFSLKRSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGGGANGGGGGGGGNNGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTPSTPPRKSPSPFLLSDKEGSALHGGGGLHSSNRMSLETDSNGCSTITCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREIVKIKASKLPKKHPRCLADGNELLRFYGTTVCCNLGLNGSSSLCLSEKCSVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEILDDDISIRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1997 434 Gene3D - 215 433 - -
Prci7g1997 434 ProSitePatterns Zinc finger C2H2 type domain signature. 202 223 IPR013087 -
Prci7g1997 434 FunFam C2H2-like zinc finger protein 224 433 - -
Prci7g1997 434 MobiDBLite consensus disorder prediction 110 183 - -
Prci7g1997 434 SUPERFAMILY ADP-ribosylation 225 433 - -
Prci7g1997 434 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1997 Prci-Chr7 34257121 34259715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1997 1 434 C2H2 Transcription Factor Family AT5G54630 67.167 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g1997 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1997 - - qsu:112024963 699.893