Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1982 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACAGCTCAACCAGAACCTCCAGGTTCGAAACTGAGGCTGCTCAATCTTCCTCCTCCATCCCCAGCTTCGCTTGGCAACATACAGATATGTCTCATGATGTCAAGCCGAGGTCTTCCATGGCTGCCTCACCTCCTTCCTCCGACCCCAACTTGCATATGATGGGTTTAGGCCTCTCTTCCCAACCTCTTGACTGGAATCAACCCTCCTTTCTTCGAGTTGCGGAGAAAGGTGGGGAGAGCAGTTTCTTGAACACATCAAGCACGAATTTTCAGCAAGAAAGTGCGATGGGGTTGTCTCAGGTTCAGTGGAGGGACAAGTTGTTTTCTACAGAGTCGTCTTCTTCAATGAACGAGTTAAAACAAGTGAACCGGGGTTTCTCTTTGGATCAAACGCAGTTTAGTCCTCAGTATAGTTCTGGAGATAGTACTGTCACAACCCAAGGCTTGGCCTCAAGCACTAACTTTCAGATGGATTTGTATGGAAACTCGTCCATATTACAAGGACTATTAGGACCTGATCATAATAACAGTCAAGTCCAGTATGATCATCAGAATCGCCAGGTAAACTTCCCGTACCAGTCAAGCTACGGATTGAGCACTAACGATCAGTTAATGCCTTCATGGTCTAAAGTTCCTCAGTTTCTGAGAGCTTCACCTCCAAAACAACAACCACCCCATAATAACAATCAGTTGCATTTCACAAATAACGCTCCCTTCTGGAACGCTTCTGAGTCTTCCAATATTAAAGATGTTAGATCTGGCGTCTTTCCCTCTTTGCAACCTCCATTCCCCTCACCAAGCTTCGATGTTCAATTCAAGAATATGTGTGAAGTGAGGGAATCGAGTAGTGTGGCGAAGAAAAGTGGGAGCGAGGCGGCACCCAAAAGGCCTCGGAACGAAACTCCGTCTTCTTTGCCAGCGTTCAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTGCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACTGCCTCGGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGGACAAGTGACAGCTTTAAGCACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAAGAGAGTCCTGGTAAATCTAAAGAAGGTGAGGGTGGAAAGCAAGATCTGAGAAGTAGAGGGCTATGTCTGGTGCCAGTGTCGAGTACATTTCCAGTGACTCAAGAAACCACGGTTGATTTTTGGACGCCAACATTCGGAGGAACTTACAGATAA 1299 0.4657 MAEDQFQATGNWWDSSTRTSRFETEAAQSSSSIPSFAWQHTDMSHDVKPRSSMAASPPSSDPNLHMMGLGLSSQPLDWNQPSFLRVAEKGGESSFLNTSSTNFQQESAMGLSQVQWRDKLFSTESSSSMNELKQVNRGFSLDQTQFSPQYSSGDSTVTTQGLASSTNFQMDLYGNSSILQGLLGPDHNNSQVQYDHQNRQVNFPYQSSYGLSTNDQLMPSWSKVPQFLRASPPKQQPPHNNNQLHFTNNAPFWNASESSNIKDVRSGVFPSLQPPFPSPSFDVQFKNMCEVRESSSVAKKSGSEAAPKRPRNETPSSLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHGQVTALSTPYMKSGAPIQHQESPGKSKEGEGGKQDLRSRGLCLVPVSSTFPVTQETTVDFWTPTFGGTYR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1982 432 CDD bHLH_AtbHLH_like 318 369 IPR045239 -
Prci7g1982 432 MobiDBLite consensus disorder prediction 376 398 - -
Prci7g1982 432 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 379 IPR036638 GO:0046983
Prci7g1982 432 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 113 413 - -
Prci7g1982 432 MobiDBLite consensus disorder prediction 1 39 - -
Prci7g1982 432 MobiDBLite consensus disorder prediction 295 321 - -
Prci7g1982 432 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Prci7g1982 432 SMART finulus 323 367 IPR011598 GO:0046983
Prci7g1982 432 MobiDBLite consensus disorder prediction 1 67 - -
Prci7g1982 432 FunFam Transcription factor bHLH123 family 322 384 - -
Prci7g1982 432 Gene3D - 322 381 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1982 Prci-Chr7 34078245 34080840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1982 244 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.636 1.86e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1982 - - gmx:100796549 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1982 7 34078245 34080840 Prci7g1982 7 34078245 34080840 ECH