Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1980 ATGGATATTTACGCCGTTGTTCTTGTTCTTTGTCTTGAGGTATCCTTAGCAGTTTTTGGTGTTGTTCAATCCCAGCTCATTACTGATGGCATGACCTTAGTTTCCGAAGGCGGAACATTTGAACTAGGTTTCTTCAGTCCTGGTTCTTCCAACAAACGTTACCTTGGAGTTTGGTACAAAAACATCCCAATTCAAACGGTCGTTTGGGTTGCCAACCGCAACAATCCAATCAATGACTCCACTGGCATCCTAACATTGAACAGCACTGGTAACCTCGTACTCAGTCAGAATGACACAGTCGTCTGGTCTACAGCCTCTCTGAGAAAGCCAGAGAGTCCTGAGGCTCTGCTTTTAGATTCTGGCAATTTAGTGGTAAGAGACAAGAAAGACCCAAACTCAGATGCCTATCTGTGGCAAAGCTTCGATTATCCATGTGATACATTCTTGCCGGGCATGAAGTTTGGGTGGGACTTACGAACTGGTCTGAATAGGCGTATAACAGCATGGAAGAGCCCAGATGATCCAGCTACAGGGGATTTCTCATGGGGCATGGTTCTTAATAGCTATCCTGATGCTTACATGATGTTGGGTAATCAGAAGTTTTACAGAGCTGGACCTTGGAATGGACTGCGTCCTACTGGTTCACCACAGCTAAAGGACAATCCACTTTTTCACTTTGAGTTTGTACAAAACAAGAATGAGGTGTACTTCATGTACAACCTTAAAAACAAGTCTGTGATCTCAAGACAAGTGCTGAACCAAACAATTAAAGCTCGACAACGCTTTGTGTGGATAGAAGATGATAAAGTTTGGAGGCCCTATGCTTCGGTGCCATTGGACTTATGTGATAGCTATGATCTGTGTGGACCTTATGGAATCTGCGTGATTTCAGGATCACCAGTGTGCCAATGTTTAACAGGATTCAGGCCTAAGTCACCAGAAGCATGGGACTCAATGGACTGGTCTAAAGGCTGTGTCCGGAAGAAGCCACTGAGCTGCGAGGACAAACTCAAGGATGGGTTTGTCACGTTCGGTGGATTGAAATTGCCAGATACTGAACATTCTTGGCTTGATGAGGCCATGAATCTAGAGCAATGCAGAGAGAAGTGCTTGAACAATTGTTCTTGTATGGCCTACACTAATTCAGATATAAGAGGAAAAGGTAGCGGCTGCGCCTTGTGGCTTGGCGATCTAGTTGACATCAGACAGTTTGCAGCTGGTGGGCAGGATCTAAATGTTCGAATGTCTGCCTCAGAACTAGAGGCTGATGGTAACAGCAAGAAGGTGGGGGTCATGGTGGCAGTGATAGCAACTGTTTCTATAGCTACAGTTACTGCTGCACTCATATTGGGGTGGCGTTATACCCAGAAAGGAAGCAAATTAAAGAGAGACCGCAGCATTAGAGTAGATCACGGAGAGAGCCAAGTGGATGACATGGACCTGCCATTCTTTGACCTGTTATCAATTGCTGCTGCTACTTGTGACTTTTCAATCGACAACAAAATTGGAGAAGGTGGATTTGGACCTGTATACATGGGAAGGCTGAAAGATGGGATAGAAATTGCTGTGAAGAGGCTTTCGGCAAACTCAGGACAAGGGTTAACTGAGTTCAAGAATGAAGTAAAACTAATTGCCAAACTTCAACACCGCAATCTTGTAAGGCTCCTTGGTTGCTGCCTTCAAGGGGAGGAGAAAATGCTGGTTTATGAATATATGCCTAATGGTAGCTTGGACTCCTTTATTTTTGATGAGAACAAGGGTAAATTATTAGATTGGTCAAAGCGTTTCCACATTATTCTAGGGATTGCAAGAGGACTCATATACCTTCATCAAGATTCTAGACTAAGGATCATTCATAGGGATCTCAAAGCAAGCAATGTCTTACTAGATAAAGATATGAATTCAAAGATTTCAGATTTTGGCATGGCTAGAATTTTTGGAGATCAAAATGAAGTAAACACAAAGAGAATAGTTGGAACTTATGGTTATATGGCACCAGAATATGCAACTGATGGACTTTTTTCAGTGAAATCCGATGTCTTTAGTTTTGGTGTCTTAGTGTTGGAGATTATATCTGGGAAGAGAAGTAGAGGATATTATGATCCAAATCACAGCCATAACCTCATTGGTCATGCATGGAAATGTTGGAAAGAAGGGAAACCAGCAGAATTGATTGATTCAAGCATGCAAGACTCATGCTTCCTATCTCAAATATTGCATTGCATTCATCTTAGTCTCTTGTGTGTTCAACAACATCCAGAGGATAGACCAAGAATGTCATGTGCCCTGTTGATGTTCTTAAGTGAGACCCAATTGCCTGAGCCTAAACAACCAGGTTACTTTGGGAATGCTTCTGTGGAAGCATATTCCTGCACAGACTTCTTGTGTACATGGAGGCTATAA 2403 0.4286 MDIYAVVLVLCLEVSLAVFGVVQSQLITDGMTLVSEGGTFELGFFSPGSSNKRYLGVWYKNIPIQTVVWVANRNNPINDSTGILTLNSTGNLVLSQNDTVVWSTASLRKPESPEALLLDSGNLVVRDKKDPNSDAYLWQSFDYPCDTFLPGMKFGWDLRTGLNRRITAWKSPDDPATGDFSWGMVLNSYPDAYMMLGNQKFYRAGPWNGLRPTGSPQLKDNPLFHFEFVQNKNEVYFMYNLKNKSVISRQVLNQTIKARQRFVWIEDDKVWRPYASVPLDLCDSYDLCGPYGICVISGSPVCQCLTGFRPKSPEAWDSMDWSKGCVRKKPLSCEDKLKDGFVTFGGLKLPDTEHSWLDEAMNLEQCREKCLNNCSCMAYTNSDIRGKGSGCALWLGDLVDIRQFAAGGQDLNVRMSASELEADGNSKKVGVMVAVIATVSIATVTAALILGWRYTQKGSKLKRDRSIRVDHGESQVDDMDLPFFDLLSIAAATCDFSIDNKIGEGGFGPVYMGRLKDGIEIAVKRLSANSGQGLTEFKNEVKLIAKLQHRNLVRLLGCCLQGEEKMLVYEYMPNGSLDSFIFDENKGKLLDWSKRFHIILGIARGLIYLHQDSRLRIIHRDLKASNVLLDKDMNSKISDFGMARIFGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGKRSRGYYDPNHSHNLIGHAWKCWKEGKPAELIDSSMQDSCFLSQILHCIHLSLLCVQQHPEDRPRMSCALLMFLSETQLPEPKQPGYFGNASVEAYSCTDFLCTWRL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1980 800 CDD STKc_IRAK 502 760 - -
Prci7g1980 800 FunFam receptor-like serine/threonine-protein kinase SD1-8 469 571 - -
Prci7g1980 800 Pfam S-locus glycoprotein domain 202 312 IPR000858 GO:0048544
Prci7g1980 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 14 141 - -
Prci7g1980 800 ProSiteProfiles EGF-like domain profile. 278 314 IPR000742 -
Prci7g1980 800 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 757 - -
Prci7g1980 800 Pfam Protein tyrosine and serine/threonine kinase 497 760 IPR001245 GO:0004672|GO:0006468
Prci7g1980 800 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Prci7g1980 800 PIRSF SRK 1 793 IPR024171 GO:0004674
Prci7g1980 800 SMART ntp_6 336 415 IPR003609 -
Prci7g1980 800 ProSiteProfiles Bulb-type lectin domain profile. 18 138 IPR001480 -
Prci7g1980 800 CDD B_lectin 24 144 IPR001480 -
Prci7g1980 800 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Prci7g1980 800 Pfam PAN-like domain 335 401 IPR003609 -
Prci7g1980 800 CDD PAN_AP_plant 330 414 - -
Prci7g1980 800 Pfam D-mannose binding lectin 66 170 IPR001480 -
Prci7g1980 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 175 IPR036426 -
Prci7g1980 800 SUPERFAMILY Protein kinase-like (PK-like) 478 765 IPR011009 -
Prci7g1980 800 ProSiteProfiles Protein kinase domain profile. 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1980 800 SMART blect_4 24 144 IPR001480 -
Prci7g1980 800 Gene3D - 21 141 IPR036426 -
Prci7g1980 800 SMART serkin_6 496 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1980 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 774 - -
Prci7g1980 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Prci7g1980 800 ProSiteProfiles PAN/Apple domain profile. 333 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1980 Prci-Chr7 34061187 34068817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1980 431 780 Receptor kinase-like Gene Family AT4G23230 54.830 1.89e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1980 PK_Tyr_Ser-Thr 8.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1980 - - gmx:100778155 1132.09