Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1978 ATGGAGCTTCATGATTGTCAATCGAGGAGAAATCTATTTTATATGCTCTCCATTGCCCAGTTTTTATTTTGGTTTTTTCCTACTTCAAGTGCAGCTGATTACCTGTCCCAATTTCAGTCAATTTCTGGAGGTAAGACCCTAGTTTCTGGAGATGGAAGTTTTGAGTTGGGTTTCTTTAGTCCCGGTAGTTCGGCAAACTTTTACTTGGGAATATGGTACAAGAAAATCCCAGTAAAAACTGTTGTGTGGGTTGCCAATCGAGACAATCCAATCAAGGACAAGTCTGGGACGTTGAGATTAGACAGAGAGGGAAACCTCGTACTTCTCAGCCAGAACGAGACTGTTGTTTGGTCAGCAAACCCAAGAAGAAAGGTCCTGAACCCAATTGCTCAGCTTCTTGGTTCTGGAAATCTAGTATTAAGAGATGAGAAAGATGAGAGTCCAGAAAATTACTTGTGGCAGAGCTTTGACTACCCTTCTGATACATTGTTACCTGGAATGAAGCTGGGGTGGGATCTAAAGACTGGTTGGAACAGGAGTCTCTCTTCTTGGAAGAATTGGGACGACCCTTCTTCCGGAGACTTCACCTGGGAACTTGTAAGCAAAGATTACCCCGAATTAGTGATGTGTAAAGGCTCATCAGAGTACTACAGAAGTGGACCCTGGAATGGCCTTGGGTTCGATGGTGCCCCAGAATTAAAGAACAATCCTCTTTTTGGGTTCAATTTTGTCTCCACTGAGGATCAGGTGTATTATACCTACTACCTTAAGAAGAAGTCAATGATATCAAGAATTGTCCTGAACCAAACCATTTATTCCCGGCAACGCTTCATATGGATCGAGGAAGCTCAAAGTTGGAGGCTTTATGCATCTGTTCCAAGAGACAACTGCGATTACTATAACCGTTGTGGCCCTTATGGAAATTGTGTCATGGGCGAGTCTCCAGTTTGCCAATGTTTAAGTGGGTTTAAGCCCAAATCACCACAGAACTGGGACATGATGGACTGGACTCAAGGGTGTGTACACAGTCAACAACTGAGCTGCGAGGACAAGAATAAAGTAGGATTTAAGAAATTTAGCGGGCTGAAATTTCCTGACTCTACGCATTCTTGGGTCAATAGGAGTATGAATCTTCAAGAATGTATGGAGAAGTGCTTGGTAAACTGTTCTTGTACAGCTTATGCAAAGTCAGATATCAGAGGAGGAGGTAGTGGATGCATTTTGTGGTTTGGTGACCTCATGGATATTAGACAGATTTCTGGTGATGGCCGAGATTTATATATTCGCATGAAAGGTTCTGAGATAGCTGAGAAAGATGGACATAAGATGAAGGTGGCTGCGATAATCATCATTGTTGCCTCAGTTGCTGTGATAATATTGATTTTCTTCTACATTGGCAAGACCATGAAATTGTTTACAGAGGAAACAGATGACAACCTGATGGCACGGTATAATGATGAAGACGACCAAGAAGATTTGGAGCTTCCTTTCCTTGACCTTCCCACAATTGTCAAAGCAACTGATGACTTCTCGATGAGCAAGAAACTTGGACAAGGTGGATTTGGTGCTGTGTACAGGGGCATGCTTGTGGATGGAAAAGAAATTGCGGTGAAGAGGCTTTCACAAAGTTCTGGACAAGGGTTGAATGAATTCAAAAATGAAGTCATATTGATTTCCAAGCTACAACATCGAAATCTTGTTAAACTTCTTGGTTGTTGCATTCAAGGGGAGGAGAAAATGCTTGTTTACGAGTACATGCCCAACAGAAGCTTGGATTCCTTTATTTTTGATCATGTAAAATGCAAGATTCTAGATTGGCCTAGGCGCTTCAACATTGTTTGTGGAATTGCTCGTGGGCTTTTGTATCTTCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTTAAAGCAAGTAATGTTTTGCTTGACAATGAGTTGAATCCAAAAATTTCAGATTTTGGCATGGCTAAAACTTTTGGAGGAGATCAGACTGAAGGAAATACAAACAGAGTGGTTGGAACATAG 2028 0.4162 MELHDCQSRRNLFYMLSIAQFLFWFFPTSSAADYLSQFQSISGGKTLVSGDGSFELGFFSPGSSANFYLGIWYKKIPVKTVVWVANRDNPIKDKSGTLRLDREGNLVLLSQNETVVWSANPRRKVLNPIAQLLGSGNLVLRDEKDESPENYLWQSFDYPSDTLLPGMKLGWDLKTGWNRSLSSWKNWDDPSSGDFTWELVSKDYPELVMCKGSSEYYRSGPWNGLGFDGAPELKNNPLFGFNFVSTEDQVYYTYYLKKKSMISRIVLNQTIYSRQRFIWIEEAQSWRLYASVPRDNCDYYNRCGPYGNCVMGESPVCQCLSGFKPKSPQNWDMMDWTQGCVHSQQLSCEDKNKVGFKKFSGLKFPDSTHSWVNRSMNLQECMEKCLVNCSCTAYAKSDIRGGGSGCILWFGDLMDIRQISGDGRDLYIRMKGSEIAEKDGHKMKVAAIIIIVASVAVIILIFFYIGKTMKLFTEETDDNLMARYNDEDDQEDLELPFLDLPTIVKATDDFSMSKKLGQGGFGAVYRGMLVDGKEIAVKRLSQSSGQGLNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYMPNRSLDSFIFDHVKCKILDWPRRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMAKTFGGDQTEGNTNRVVGT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1978 675 Pfam D-mannose binding lectin 80 185 IPR001480 -
Prci7g1978 675 ProSiteProfiles PAN/Apple domain profile. 348 431 IPR003609 -
Prci7g1978 675 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Prci7g1978 675 Gene3D - 28 156 IPR036426 -
Prci7g1978 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 585 - -
Prci7g1978 675 SMART serkin_6 510 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1978 675 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 669 - -
Prci7g1978 675 Gene3D Transferase(Phosphotransferase) domain 1 586 675 - -
Prci7g1978 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 156 - -
Prci7g1978 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Prci7g1978 675 Pfam PAN-like domain 350 416 IPR003609 -
Prci7g1978 675 ProSiteProfiles Protein kinase domain profile. 510 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1978 675 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Prci7g1978 675 CDD PAN_AP_plant 344 429 - -
Prci7g1978 675 Gene3D Phosphorylase Kinase; domain 1 474 585 - -
Prci7g1978 675 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Prci7g1978 675 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Prci7g1978 675 SUPERFAMILY Protein kinase-like (PK-like) 496 675 IPR011009 -
Prci7g1978 675 SMART ntp_6 351 430 IPR003609 -
Prci7g1978 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 347 430 - -
Prci7g1978 675 Pfam Protein tyrosine and serine/threonine kinase 511 664 IPR001245 GO:0004672|GO:0006468
Prci7g1978 675 SMART blect_4 38 159 IPR001480 -
Prci7g1978 675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 586 675 - -
Prci7g1978 675 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Prci7g1978 675 CDD B_lectin 39 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1978 Prci-Chr7 34038918 34043005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1978 445 675 Receptor kinase-like Gene Family AT4G23230 54.978 6.12e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1978 PK_Tyr_Ser-Thr 1.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1978 - - cave:132173746 902.123