Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1971 ATGGAAAACTTCAGAAAGCTTTCTGTGTATTTTTTGTTACTGTGCTTCACAAGCATGTCCTCCACGCTGGACATAATCACCCCAAGCCAGCCCCTTCGTGATGGTCACAATGAAAGTCTGGTTTCAGAAGGAGGAATCTTTGAAGCTGGATTCTTCAACCCTCAAAATTCAAAGAGCCGTTACGTGGGAATATGGTACAAAAACATTGCCCAGAGAACGGTCGTATGGGTGGCCAACAGAGAGAAACCACTCCACGATGCCTCAGGAGTTTTGCAGGTAGACAGTGATAAAGGAATTCTTAGAATCTTGGACAGCAAAGGGTTTGAAGCTTGGTCCTCGAATGCATCAAAAAAGGCAGAGAACCCAGTTGTGCAGCTGTTGGATTCAGGAAACCTCGTTCTGAGAGAGGAAAAGAACTTGAGCAGCATATTATGGCAGAGCTTTGATTATCCAGGTGATACTTTTCTCCCTGGAATGAAAATTAGAAGCAACATAAGGACTGGTCAGCATGTGGGAATAACTTCTTGGAAATCCTGGCAAGATCCTACACCTGGTGACTTTTCTATGCACATAGATACTAAAGGCCTTCCTCAGCTGGTTATTACAAATGGAAACAAAAGAATATACAGAGCAGGACCGTGGAATGGGCTTGGTTTTACAGGTACACCTGAACTGAGAGATATCAAATTCATGAAATTACTTTTTGAGCTAAATGAAGATGAAGTCTTCTATGAATACAAAATCCTCAATAATTCAACTCTAATGAGAAGCAGACTGTTGCCCGAAGGCTATCCTTTACGTTTAACATGGTCTTCTCAGAAAAATGGATGGGAAGTTATCATGCCCAGCCCGTCTGACCAGTGTGAAGGATATTCTTTCTGTGGTCCAAATACGAACTGTAACGGCAATGACCCTCGGAGTTGTAAGTGCTTGACCGGATTCACAACAAACTCTTCTGGAGGGTGTTCCCGAGCAATTCGACTTGAATGTAGAAAGGGAGACAGCTTTCAAAAGTATCAGCGAATGAAATTGCCAGACACATCTTCTTCCTGGTACAACAAGACCATGAGCTTAGGTGAATGTGAAAAACTATGTTTGAGAAGCTGCAATTGCACCGCGTACTCTAGTTTGAATATCAGTGACCAAGGAAGTGGCTGCTTGCATTGGTTTGATAGCATTGTCGACCTGAGAGAACTCAGAGAGGGAGGACAAGACTTTTATATACGAGTATCTGTATCAGACCAAGATCTTACAGTGAAAAATGGCATGGACAAGAGGAAGCTTGCAGGAATTGTGATCGGCTGCTCTATATTAATGATGAGTACCCTAGTACTAGTCGGATTGACCATATGGATCAAGAAGAGGCTGTTGCATCCAGGGAAAGCGATTTATCGGGAGGACAAGAGTGACAAAGAGGACATTGATTTACCAATATATGAATTTTCAACCATTTCTAATGCCACAAATCAGTTTTCAGAGAGGAATAAATTGGGACAAGGCGGCTTTGGACCGGTGTACAAGGGTATACTACATGATGGGCAAGAAATTGCAGTAAAGAGGCTTTCCAAAACATCGGGACAAGGAACGAACGAGTTTAAAAATGAAGTCTTGTTGATTGCAAAACTCCAACACCGCAATCTTGTGAAGCTTCTTGGTTGTTCCATTCAACAAGAAGAAAAGTTGTTGATTTATGAATTCATGCTTAACGGAAGCCTAGACTATTTCATTTTCAATTCAAAAAAAACTAAGCTATTAGATTGGACTAAGCGATTCCATATTATTGACGGGATTGCTCGGGGGCTCCTTTATCTTCATCATGACTCAAGATTGCGAATTATCCATAGAGATCTCAAAACTAGTAATATTCTTCTTGATAATAATATGAATCCAAAAATATCAGACTTCGGTCTAGCTAGAATTTTTGGAGGAGATCAAACGGAGGCCAATACAAATAGAGTGATGGGAACATATGGATATATGCCTCCCGAATATGCAATGCATGGATCTTTTTCTGACAAATCTGATGTCTTTAGCTTTGGAGTAATTGTATTGGAGATAATTAGTGGAAGAAAGAATAGGGGATTTTGTGATCCACATCATCATCTTAACCTGCTAGGGCATGCGTGGAAAATTTGGATTGAAAAAAGACCAATGGATCTAATGGATGAACAACTACAAGATTCAGTGGTTTCATCGGAACTGTTGAGATGTATTCAGGTTGGCCTATTATGTGTGCAACAAAGACCAGAGGATAGACCTAACATGTCAACTGTGGTTTTGATGTTGAATGGGGAAAAGTTACTTCCTAACCCAAGCGAGCCTGGGTTCTATATTGGAAGGGATAATCAAACCCTGGCAGATTCTACTATAAGAAGTAGTGAAGAGTGTTCAATTAATGAGGCTTCCAACTCAACATTAGAGCCAAGATAG 2430 0.4091 MENFRKLSVYFLLLCFTSMSSTLDIITPSQPLRDGHNESLVSEGGIFEAGFFNPQNSKSRYVGIWYKNIAQRTVVWVANREKPLHDASGVLQVDSDKGILRILDSKGFEAWSSNASKKAENPVVQLLDSGNLVLREEKNLSSILWQSFDYPGDTFLPGMKIRSNIRTGQHVGITSWKSWQDPTPGDFSMHIDTKGLPQLVITNGNKRIYRAGPWNGLGFTGTPELRDIKFMKLLFELNEDEVFYEYKILNNSTLMRSRLLPEGYPLRLTWSSQKNGWEVIMPSPSDQCEGYSFCGPNTNCNGNDPRSCKCLTGFTTNSSGGCSRAIRLECRKGDSFQKYQRMKLPDTSSSWYNKTMSLGECEKLCLRSCNCTAYSSLNISDQGSGCLHWFDSIVDLRELREGGQDFYIRVSVSDQDLTVKNGMDKRKLAGIVIGCSILMMSTLVLVGLTIWIKKRLLHPGKAIYREDKSDKEDIDLPIYEFSTISNATNQFSERNKLGQGGFGPVYKGILHDGQEIAVKRLSKTSGQGTNEFKNEVLLIAKLQHRNLVKLLGCSIQQEEKLLIYEFMLNGSLDYFIFNSKKTKLLDWTKRFHIIDGIARGLLYLHHDSRLRIIHRDLKTSNILLDNNMNPKISDFGLARIFGGDQTEANTNRVMGTYGYMPPEYAMHGSFSDKSDVFSFGVIVLEIISGRKNRGFCDPHHHLNLLGHAWKIWIEKRPMDLMDEQLQDSVVSSELLRCIQVGLLCVQQRPEDRPNMSTVVLMLNGEKLLPNPSEPGFYIGRDNQTLADSTIRSSEECSINEASNSTLEPR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1971 809 CDD STKc_IRAK 497 764 - -
Prci7g1971 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 770 - -
Prci7g1971 809 CDD B_lectin 29 151 IPR001480 -
Prci7g1971 809 ProSiteProfiles PAN/Apple domain profile. 330 411 IPR003609 -
Prci7g1971 809 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Prci7g1971 809 Gene3D Phosphorylase Kinase; domain 1 464 566 - -
Prci7g1971 809 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 749 - -
Prci7g1971 809 Pfam Protein tyrosine and serine/threonine kinase 494 760 IPR001245 GO:0004672|GO:0006468
Prci7g1971 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 215 IPR036426 -
Prci7g1971 809 MobiDBLite consensus disorder prediction 789 809 - -
Prci7g1971 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 148 - -
Prci7g1971 809 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Prci7g1971 809 Gene3D - 18 148 IPR036426 -
Prci7g1971 809 SMART ntp_6 331 410 IPR003609 -
Prci7g1971 809 SMART serkin_6 491 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1971 809 PIRSF SRK 2 809 IPR024171 GO:0004674
Prci7g1971 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Prci7g1971 809 Pfam PAN-like domain 330 396 IPR003609 -
Prci7g1971 809 CDD PAN_AP_plant 328 411 - -
Prci7g1971 809 Gene3D Hepatocyte Growth Factor 327 408 - -
Prci7g1971 809 Gene3D Transferase(Phosphotransferase) domain 1 567 768 - -
Prci7g1971 809 ProSiteProfiles Protein kinase domain profile. 491 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1971 809 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 459 566 - -
Prci7g1971 809 SMART blect_4 29 151 IPR001480 -
Prci7g1971 809 Pfam D-mannose binding lectin 73 177 IPR001480 -
Prci7g1971 809 SUPERFAMILY Protein kinase-like (PK-like) 476 762 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1971 Prci-Chr7 34028465 34032895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1971 414 777 Receptor kinase-like Gene Family AT4G23190 53.100 1.62e-129 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1971 PK_Tyr_Ser-Thr 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1971 - - gmx:100802416 1053.51