Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1955 ATGGCCACCACAGAGCTAGACGATTCACGTGCTTCACGGTTGCAGGATAACCACCACACAACAGATGACGACGAAGATTACAGCGTCACAGACAGCTTGGACGACGCGGAGGAGGAGACGGATGAAGAAGAAGGGAACAACGGAACACACGACGGTGACAAGGCGGTCGGGTGGTGCTGTCGGGGGAAAGGGGTGACTGGAGGGTGCGGTTTCGGCGGGAAGGTGCTGGACCCGAGGGCGAAGTGGGTTCAAGAATGGAACAGGGTGTTCCTGCTGGTGTGTGCGATGGGCTTGTTCGTGGACCCACTCTTCTTCTACGCCCTCTCCGTGAGCGACACGTACATGTGCCTCTTCGTCGACGGATGGTTCGCCGTCACCGTCATGGCTCTCCGCTGCATGACGGACGCCTTGCACCTCTGGAACATGTGGCTGCAATTCAAAATGGGCAAGCGCCACTTCGGAAGTGGCCTGGCCGTCAATACGAGCCGTCGCTTGGCCGCTCTTCGCTATCTAAAGGTCAAGACAGGCTTCTTCTTCGACCTCTTCGTCATACTCCCTCTACCTCAGGCGCGCACACACTCCCTTTTGTTTTCGCAGATTGTACTATGGGTTACGATCCCGTATCTGTTGGAGAATGGATCGGTGACGTTGGCGATGACGGTGTTCTTAATAATGTTTCTGTTTCAATATCTTCCAAAGATATATCACTCTGTTTGCCTCTTGCGACGCTTGCAAAACCTCTCCGGCTACATTTTTGGCACCGTTTGGTGGGGAATTGCCCTTAACATGATCGCCTATTTTGTCGCCTCCCATGCAGCAGGAGCATGCTGGTACTTGCTAGGGATTCAGAGGGCGGCCAAGTGTCTGAAAGAGCAATGCGGGAAAACGAGCGGGTGTGGGCTAGGAATACTGTCTTGCAAGGAACCAATATATTATGGAACCAATGGGATGGTGAGGGACAGAGCAAGACAGTCATGGGCAGAGAACAGGCAAGCCAGGTCGACGTGCTTGGACAGCTCTGACAACTACGACTATGGAGCTTATAAATGGACCGTTCAGCTCGTCACCAACGACAGCCGACTTGAAAAGATTCTCTTCCCTATCTTTTGGGGCCTCATGACGCTAAGCACTTTCGGGAACCTGGAGAGCACAACAGAATGGCTAGAAGTGGTTTTCAACATCATTGTTTTGACCAGCGGCCTTATTCTGGTCACCATGTTGATTGGAAACATCAAGGTTTTCTTGCATGCAACGACATCAAAAAAGCAAGCGATGCAACTGAAGATGAGGAACATAGAGTGGTGGATGAGGAAGAGGCACCTTCCTCCTGGGTTTCGGCAGCGCGTGAGGAACTACGAACGGCAGCGATGGGCGGCGACGCGTGGAGTGGACGAATTCGAGATGATCAGAAATCTGCCGGAGGGCCTCCGAAGAGACATCAAGTACCATCTCTGCTTGGACTTGGTCCGGCAGGTTCCCCTGTTTCAGCACATGGATGAACTGGTGCTGGAGAACATCTGCGACCGCGTGAAGTCACTCATATTCACAAAAGGAGAAACAATAACCAGAGAGGGAGATCCAGTTCAGAGAATGCTGTTTGTTGTGAGAGGTCATCTTCAGAGCAGTCAAGTTCTGAGAGACGGCGTGAAAAGTTACTGCATGTTAGGGCCAGGGAACTTCAGCGGCGACGAGCTCCTCTCGTGGTGTCTGCGGAGGCCGTTCATAGAGCGGCTGCCGCCGTCGTCGTCGACGCTGATCACCCTGGAAACGACGGAGGCGTTTGGGCTCGAAGCGGAGGACGTCAAGTACGTGACGCAGCACTTCAGGTACACGTTCATGAACGAGAAGGTGAAGAGGAGCGCCAGGTATTACTCGCCGGGATGGAGAACTTGGGCAGCCGTTGCCATTCAGCTCGCGTGGAGGAGGCACAAGCATCGCCTGACCTTGGCGTCGTTGTCGTTCATAAGGCCTCGAAGGCCTGTGTCTCGCTGCTCTTCTCTTGGAGAGGACAGACTTCGCCTCTACACTGCCTTGTTGACCTCACCAAAGCCTAATCAGGATGATTTTGACTTTTGA 2076 0.5347 MATTELDDSRASRLQDNHHTTDDDEDYSVTDSLDDAEEETDEEEGNNGTHDGDKAVGWCCRGKGVTGGCGFGGKVLDPRAKWVQEWNRVFLLVCAMGLFVDPLFFYALSVSDTYMCLFVDGWFAVTVMALRCMTDALHLWNMWLQFKMGKRHFGSGLAVNTSRRLAALRYLKVKTGFFFDLFVILPLPQARTHSLLFSQIVLWVTIPYLLENGSVTLAMTVFLIMFLFQYLPKIYHSVCLLRRLQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCGKTSGCGLGILSCKEPIYYGTNGMVRDRARQSWAENRQARSTCLDSSDNYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRHLPPGFRQRVRNYERQRWAATRGVDEFEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFMNEKVKRSARYYSPGWRTWAAVAIQLAWRRHKHRLTLASLSFIRPRRPVSRCSSLGEDRLRLYTALLTSPKPNQDDFDF 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1955 691 FunFam cyclic nucleotide-gated ion channel 4 492 610 - -
Prci7g1955 691 FunFam Cyclic nucleotide-gated ion channel 1 421 485 - -
Prci7g1955 691 SUPERFAMILY Voltage-gated potassium channels 78 415 - -
Prci7g1955 691 Gene3D Jelly Rolls 492 610 IPR014710 -
Prci7g1955 691 Pfam Cyclic nucleotide-binding domain 515 602 IPR000595 -
Prci7g1955 691 SMART cnmp_10 494 623 IPR000595 -
Prci7g1955 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 68 656 - -
Prci7g1955 691 CDD CAP_ED 494 600 IPR000595 -
Prci7g1955 691 Pfam Ion transport protein 86 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci7g1955 691 Gene3D Helix hairpin bin 419 485 - -
Prci7g1955 691 MobiDBLite consensus disorder prediction 27 46 - -
Prci7g1955 691 MobiDBLite consensus disorder prediction 9 26 - -
Prci7g1955 691 MobiDBLite consensus disorder prediction 1 50 - -
Prci7g1955 691 SUPERFAMILY cAMP-binding domain-like 420 608 IPR018490 -
Prci7g1955 691 ProSiteProfiles cAMP/cGMP binding motif profile. 494 604 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1955 Prci-Chr7 33921259 33927061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1955 73 690 Ion Channels AT5G54250 79.459 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1955 K05391 - zju:107430493 1115.52