Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1954 ATGTTGAGTTGGCTACGAGAGTTTGAGACAGAAATTTGGGAATATCCTTCTGTGAAATTTTGGGGTTTTGGGAACCAAAAAATGTTATCGTCTACGCCTTCGGCGATAGCGAGGAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCCAAGGACTTGCCGCCAGCATTGCCAGCTCGTCCGACGTCCAGAGCTCGGCTTCCCTCAGCCGGACGGTCGTTGCCGAATAAATTTAGGATTGAAGGTGATCAGAATGCAACAACAGGCTCCAAGAATAATTCCAATGCAAAGGCAAAAGAAGGGACCAAGAAGAAAGAAGGGGACGCGGGACATAAGAGAAAAGGGAGTTTTGCGAGCAAGAAGATGAAGCAAGACATAGAATCGCCTTACATCGTGACATCGGAAGAGAATATGAACCAACCATCATCAGAAGACGCTGTTTCAGTATATACTGCTTCCATAGAGACATCGGGGAAGATTCAGGAATTGGCTGGTGACGACAACGTTGCTTATTACATAAAAAAGAAACTACGTGTTTGGTGTAGGTCGCCAAGTGGACGGTGGGCTCTAGGACAGATACAATCAACTTCAGGAGATGAAGCTTTTGTTTCGCTCTCAAACGGAGGCAAAATGAAAGTGGCAAGATCGGAGCTTTTACCAGCTAATCCAGATATTTTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCAGTTTAGATATTCTCAGGACATGATTTATAATAAAGCAGGACCCGTTTTAATTGCACTCAACCCCTTCAAAGAGATCCAGATATATGGAAATGATTATATCTCAGCGTATAGGCAGAAGACTATGGATAGTCCTCACGTTTATGCTATGGCAGATGTGGCTTTTAATGAGATGATGAGAGGTGAAGTAAACCAATCCATTATTATAAGTGGCGAAAGTGGATCTGGTAAGACAGAGACAGCAAAATTTGCTATGCAATACTTGGCAGTTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCGCCCTGGGGAGGATGTGTGGGGCCAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGACCAATGGTGAGAGGTCATATCATATCTTTTACCAACTTTGTGCTGGTTCTTCGCCTGATATTAAAGAGAGACTGAATCTTAAAGCTGCTAGTGAATATAAATATCTCAGTCAAAGTGACTGCATGACAATTGATGGTATTGATGATGTTAAAAAGTTCCATAAACTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCAAGAGCTAGTCTTCAAGATGATCGCTGCAATACTATGGCTAGGAAATATATCATTCAAAGTAACCGACAACGAAAATCACATTGAGGTTGTAGACGATGAAGCTGTTACCAGTGCGGCCCTACTAATGGGTTGCAGTTCCAAGGATTTAATGGTGACTTTATCTACTCGAAAAATCCAAGCTGGCAAAGATAGTATTGCCAAAAGGTTGACATTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATATATGCAAGCTTATTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAATCATTCCAGAAAAACAGCTTCGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGACATCTGTTTAAACTTGAGCAGGATGACTATGAATTGGACGGCGTTGATTGGACAAAAGTGGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAGCCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCCAAGGCTACTGATATAACATTTGCCAACAAACTTAGACAGTACTTGAACGCCAATCCTTGTTTCAAAGGAGAAAGAGGCAGAGGTTTTTGTGTTCGTCACTATGCAGGGGAGGTTTCTTATGACACAAATGGATTTCTAGAAAAGAACAGAGATCCACTGCCATCAGATTCCATTCAACTCCTGTCATCATGCAATTGTCAACTGCTGCAGTTGTTCTCCAAAAAGATAGATCAATCTAAGCACTCAAATTCCTCCCACGTAGGTGCACTGGGTTCACAAAAGCAGAGTGTAGGGACAACGTTCAAGGGCCAATTGTTCAAGTTGATGAATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAATACTAGGCACAGTGCTGGAATATATGACGAGGACCTTGTCTTACAACAGCTCATGTGTTGTGGAGTTTTGGAGATTGTTAGAATTTCAAGGGCTGGCTATCCTACTCGAATACTGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTTTTGCTTTCTGAGGCCAGTGCATCCCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAGGAGGGCAGATTGGTGTCTTGGAGGATAGGAGGAAAAAGATTATAGTGAGAATACTTCGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTCTATGTCCTCAAGAACGGAGCAATAGCTTTACAATCCATTGTTCGTCGTGAGATTGCGAGAAAGACATATCATGCCATGAAGTCTGCATCCATTGCTTCTGAAAAGCTTCACCAGACCCAGGCAATCACCCGTTTACAATCTGTGATCCGCGGGTGGTTGGTGCGAAGGCGTGCTAGCAGTGTCTTTCATAAGTTGAAGAAAGATGGTAAAATTTCTAAACATAAGCAAAAGTCACGTTCTAAGATGACAGAAGTGAAGGATTTATCTAAAGATCAGGTTCAGAATCTGCCTTCAACTTTAGAACTCCAGAACCAGGTTGTCAAGGCTGAAACAACTCTGAAGCAGAAGGAAGAGGAAAATACTGCATTGAGGGAACAATTAAAACAGTTTGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCGATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAAAAGAGTCTTTCGGTGGCTAGGAGGAGCCTTGCAGCTGAGAACTCCACTGATCAACCTGGAAGATATGATGCTATGTCACCTTGCTTCTATGACTCTGAAGATGCTACTTCCATGGAATCTAGAACACCCGCGGGCAGCACACCTATCAAGTTTCCTAGCACTCCATTTGAGAATGGAGCAGGGAGAAATGCCAATGATACTTTCAACGCTGTCAGCAATCTCATGAAAGAATTTGAGCAGCGGAGACAGATTTTTGACGACGATGCCAAAGCTCTACTTGCAGTTAAATTAGGGCGCCCTGCTCACATGAATCCCAACGAAGAACTTCGGCAGCTTAAACGCCGATTTGAAGGATGGAAGAAAGAATACAAGGGAAGATTACGGGAAACAAAAGCCAGGCTTTGTAAGACAGGGAGTCCAGAAGCCGAAATTAGTTGTCAAAAGTGGTGGGGGAAGATAAGTTCAAGAGGACTATAG 3723 0.4241 MLSWLREFETEIWEYPSVKFWGFGNQKMLSSTPSAIARSSLEEMLESIRRRGEEEKPKDLPPALPARPTSRARLPSAGRSLPNKFRIEGDQNATTGSKNNSNAKAKEGTKKKEGDAGHKRKGSFASKKMKQDIESPYIVTSEENMNQPSSEDAVSVYTASIETSGKIQELAGDDNVAYYIKKKLRVWCRSPSGRWALGQIQSTSGDEAFVSLSNGGKMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYNKAGPVLIALNPFKEIQIYGNDYISAYRQKTMDSPHVYAMADVAFNEMMRGEVNQSIIISGESGSGKTETAKFAMQYLAVLSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSALGRMCGAKIQTFLLEKSRVVQLTNGERSYHIFYQLCAGSSPDIKERLNLKAASEYKYLSQSDCMTIDGIDDVKKFHKLMKALDDVRICKEDQELVFKMIAAILWLGNISFKVTDNENHIEVVDDEAVTSAALLMGCSSKDLMVTLSTRKIQAGKDSIAKRLTLWQATDTRDGLAKFIYASLFDWLVEQINKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWTKVDFEDNQECLDLFEKKPLGLISLLDEESNFPKATDITFANKLRQYLNANPCFKGERGRGFCVRHYAGEVSYDTNGFLEKNRDPLPSDSIQLLSSCNCQLLQLFSKKIDQSKHSNSSHVGALGSQKQSVGTTFKGQLFKLMNQLESTTPHFIRCIKPNTRHSAGIYDEDLVLQQLMCCGVLEIVRISRAGYPTRILHQEFARRYGFFLLSEASASQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRGGQIGVLEDRRKKIIVRILRVQKWLRGHQARRNFYVLKNGAIALQSIVRREIARKTYHAMKSASIASEKLHQTQAITRLQSVIRGWLVRRRASSVFHKLKKDGKISKHKQKSRSKMTEVKDLSKDQVQNLPSTLELQNQVVKAETTLKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQKSLSVARRSLAAENSTDQPGRYDAMSPCFYDSEDATSMESRTPAGSTPIKFPSTPFENGAGRNANDTFNAVSNLMKEFEQRRQIFDDDAKALLAVKLGRPAHMNPNEELRQLKRRFEGWKKEYKGRLRETKARLCKTGSPEAEISCQKWWGKISSRGL 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1954 1240 Coils Coil 1025 1059 - -
Prci7g1954 1240 PANTHER MYOSIN 227 1220 - -
Prci7g1954 1240 Gene3D - 605 793 - -
Prci7g1954 1240 Gene3D Kinesin motor domain 233 836 IPR036961 -
Prci7g1954 1240 MobiDBLite consensus disorder prediction 104 128 - -
Prci7g1954 1240 MobiDBLite consensus disorder prediction 87 103 - -
Prci7g1954 1240 Pfam IQ calmodulin-binding motif 965 983 IPR000048 GO:0005515
Prci7g1954 1240 Pfam IQ calmodulin-binding motif 910 926 IPR000048 GO:0005515
Prci7g1954 1240 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 181 230 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 SMART iq_5 963 985 IPR000048 GO:0005515
Prci7g1954 1240 SMART iq_5 905 927 IPR000048 GO:0005515
Prci7g1954 1240 SMART iq_5 928 950 IPR000048 GO:0005515
Prci7g1954 1240 ProSiteProfiles Myosin motor domain profile. 234 904 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 FunFam Unconventional myosin-XIX 605 793 - -
Prci7g1954 1240 ProSiteProfiles IQ motif profile. 929 958 IPR000048 GO:0005515
Prci7g1954 1240 Gene3D - 837 905 - -
Prci7g1954 1240 ProSiteProfiles IQ motif profile. 964 993 IPR000048 GO:0005515
Prci7g1954 1240 FunFam Myosin heavy chain 417 473 - -
Prci7g1954 1240 Pfam Myosin head (motor domain) 236 892 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 CDD MYSc_Myo8 248 892 IPR036022 -
Prci7g1954 1240 ProSiteProfiles IQ motif profile. 910 935 IPR000048 GO:0005515
Prci7g1954 1240 MobiDBLite consensus disorder prediction 1116 1144 - -
Prci7g1954 1240 FunFam Myosin IE heavy chain 474 582 - -
Prci7g1954 1240 Gene3D Myosin VI head, motor domain, U50 subdomain 474 582 - -
Prci7g1954 1240 SMART MYSc_2a 228 905 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 MobiDBLite consensus disorder prediction 47 61 - -
Prci7g1954 1240 MobiDBLite consensus disorder prediction 47 130 - -
Prci7g1954 1240 Gene3D - 417 473 - -
Prci7g1954 1240 PRINTS Myosin heavy chain signature 646 674 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 PRINTS Myosin heavy chain signature 361 388 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 PRINTS Myosin heavy chain signature 264 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 PRINTS Myosin heavy chain signature 318 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1954 1240 Gene3D - 909 958 - -
Prci7g1954 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 956 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1954 Prci-Chr7 33900050 33910569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1954 28 1234 Myosins gene family AT5G54280 61.147 0.0 1526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1954 K10357 - gmx:100819335 1702.18