Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1953 ATGTTGAGTTGGCTACGAGAGTTTGAGACAGAAATTTGGGAATATCCTTCTGTGAAATTTTGGGGTTTTGGGAACCAAAAAATGTTATCGTCTACGCCTTCGGCGATAGCGAGGAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCCAAGGACTTGCCGCCAGCATTGCCAGCTCGTCCGACGTCCAGAGCTCGGCTTCCCTCAGCCGGACGGTCGTTGCCGAATAAATTTAGGATTGAAGGTGATCAGAATGCAACAACAGGCTCCAAGAATAATTCCAATGCAAAGGCAAAAGAAGGGACCAAGAAGAAAGAAGGGGACGCGGGACATAAGAGAAAAGGGAGTTTTGCGAGCAAGAAGATGAAGCAAGACATAGAATCGCCTTACATCGTGACATCGGAAGAGAATATGAACCAACCATCATCAGAAGACGCTGTTTCAGTATATACTGCTTCCATAGAGACATCGGGGAAGATTCAGGAATTGGCTGGTGACGACAACGTTGCTTATTACATAAAAAAGAAACTACGTGTTTGGTGTAGGTCGCCAAGTGGACGGTGGGCTCTAGGACAGATACAATCAACTTCAGGAGATGAAGCTTTTGTTTCGCTCTCAAACGGAGGCAAAATGAAAGTGGCAAGATCGGAGCTTTTACCAGCTAATCCAGATATTTTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCAGTTTAGATATTCTCAGGACATGATTTATAATAAAGCAGGACCCGTTTTAATTGCACTCAACCCCTTCAAAGAGATCCAGATATATGGAAATGATTATATCTCAGCGTATAGGCAGAAGACTATGGATAGTCCTCACGTTTATGCTATGGCAGATGTGGCTTTTAATGAGATGATGAGAGGTGAAGTAAACCAATCCATTATTATAAGTGGCGAAAGTGGATCTGGTAAGACAGAGACAGCAAAATTTGCTATGCAATACTTGGCAGTTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCGCCCTGGGGAGGATGTGTGGGGCCAAAATTCAAACCTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGACCAATGGTGAGAGGTCATATCATATCTTTTACCAACTTTGTGCTGGTTCTTCGCCTGATATTAAAGAGAGACTGAATCTTAAAGCTGCTAGTGAATATAAATATCTCAGTCAAAGTGACTGCATGACAATTGATGGTATTGATGATGTTAAAAAGTTCCATAAACTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCAAGAGCTAGTCTTCAAGATGATCGCTGCAATACTATGGCTAGGAAATATATCATTCAAAGTAACCGACAACGAAAATCACATTGAGGTTGTAGACGATGAAGCTGTTACCAGTGCGGCCCTACTAATGGGTTGCAGTTCCAAGGATTTAATGGTGACTTTATCTACTCGAAAAATCCAAGCTGGCAAAGATAGTATTGCCAAAAGGTTGACATTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATATATGCAAGCTTATTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAATCATTCCAGAAAAACAGCTTCGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGACATCTGTTTAAACTTGAGCAGGATGACTATGAATTGGACGGCGTTGATTGGACAAAAGTGGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGGTTTCTTATGACACAAATGGATTTCTAGAAAAGAACAGAGATCCACTGCCATCAGATTCCATTCAACTCCTGTCATCATGCAATTGTCAACTGCTGCAGTTGTTCTCCAAAAAGATAGATCAATCTAAGCACTCAAATTCCTCCCACGTAGGTGCACTGGGTTCACAAAAGCAGAGTGTAGGGACAACGTTCAAGGGCCAATTGTTCAAGTTGATGAATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAATACTAGGCACAGTGCTGGAATATATGACGAGGACCTTGTCTTACAACAGCTCATGTGTTGTGGAGTTTTGGAGATTGTTAGAATTTCAAGGGCTGGCTATCCTACTCGAATACTGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTTTTGCTTTCTGAGGCCAGTGCATCCCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAGGAGGGCAGATTGGTGTCTTGGAGGATAGGAGGAAAAAGATTATAGTGAGAATACTTCGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTCTATGTCCTCAAGAACGGAGCAATAGCTTTACAATCCATTGTTCGTCGTGAGATTGCGAGAAAGACATATCATGCCATGAAGTCTGCATCCATTGCTTCTGAAAAGCTTCACCAGACCCAGGCAATCACCCGTTTACAATCTGTGATCCGCGGGTGGTTGGTGCGAAGGCGTGCTAGCAGTGTCTTTCATAAGTTGAAGAAAGATGGTAAAATTTCTAAACATAAGCAAAAGTCACGTTCTAAGATGACAGAAGTGAAGCAGGATTTATCTAAAGATCAGGTTCAGAATCTGCCTTCAACTTTAGAACTCCAGAACCAGGTTGTCAAGGCTGAAACAACTCTGAAGCAGAAGGAAGAGGAAAATACTGCATTGAGGGAACAATTAAAACAGTTTGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCGATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAAAAGAGTCTTTCGGTGGCTAGGAGGAGCCTTGCAGCTGAGAACTCCACTGATCAACCTGGAAGATATGATGCTATGTCACCTTGCTTCTATGACTCTGAAGATGCTACTTCCATGGAATCTAGAACACCCGCGGGCAGCACACCTATCAAGTTTCCTAGCACTCCATTTGAGAATGGAGCAGGGAGAAATGCCAATGATACTTTCAACGCTGTCAGCAATCTCATGAAAGAATTTGAGCAGCGGAGACAGATTTTTGACGACGATGCCAAAGCTCTACTTGCAGTTAAATTAGGGCGCCCTGCTCACATGAATCCCAACGAAGAACTTCGGCAGCTTAAACGCCGATTTGAAGGATGGAAGAAAGAATACAAGGGAAGATTACGGGAAACAAAAGCCAGGCTTTGTAAGACAGGGAGTCCAGAAGCCGAAATTAGTTGTCAAAAGTGGTGGGGGAAGATAAGTTCAAGAGGACTATAG 3567 0.4233 MLSWLREFETEIWEYPSVKFWGFGNQKMLSSTPSAIARSSLEEMLESIRRRGEEEKPKDLPPALPARPTSRARLPSAGRSLPNKFRIEGDQNATTGSKNNSNAKAKEGTKKKEGDAGHKRKGSFASKKMKQDIESPYIVTSEENMNQPSSEDAVSVYTASIETSGKIQELAGDDNVAYYIKKKLRVWCRSPSGRWALGQIQSTSGDEAFVSLSNGGKMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYNKAGPVLIALNPFKEIQIYGNDYISAYRQKTMDSPHVYAMADVAFNEMMRGEVNQSIIISGESGSGKTETAKFAMQYLAVLSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSALGRMCGAKIQTFLLEKSRVVQLTNGERSYHIFYQLCAGSSPDIKERLNLKAASEYKYLSQSDCMTIDGIDDVKKFHKLMKALDDVRICKEDQELVFKMIAAILWLGNISFKVTDNENHIEVVDDEAVTSAALLMGCSSKDLMVTLSTRKIQAGKDSIAKRLTLWQATDTRDGLAKFIYASLFDWLVEQINKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWTKVDFEDNQECLDLFEKVSYDTNGFLEKNRDPLPSDSIQLLSSCNCQLLQLFSKKIDQSKHSNSSHVGALGSQKQSVGTTFKGQLFKLMNQLESTTPHFIRCIKPNTRHSAGIYDEDLVLQQLMCCGVLEIVRISRAGYPTRILHQEFARRYGFFLLSEASASQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRGGQIGVLEDRRKKIIVRILRVQKWLRGHQARRNFYVLKNGAIALQSIVRREIARKTYHAMKSASIASEKLHQTQAITRLQSVIRGWLVRRRASSVFHKLKKDGKISKHKQKSRSKMTEVKQDLSKDQVQNLPSTLELQNQVVKAETTLKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQKSLSVARRSLAAENSTDQPGRYDAMSPCFYDSEDATSMESRTPAGSTPIKFPSTPFENGAGRNANDTFNAVSNLMKEFEQRRQIFDDDAKALLAVKLGRPAHMNPNEELRQLKRRFEGWKKEYKGRLRETKARLCKTGSPEAEISCQKWWGKISSRGL 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1953 1188 FunFam Myosin IE heavy chain 474 582 - -
Prci7g1953 1188 PRINTS Myosin heavy chain signature 318 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 PRINTS Myosin heavy chain signature 646 674 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 PRINTS Myosin heavy chain signature 264 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 PRINTS Myosin heavy chain signature 361 388 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 903 IPR027417 -
Prci7g1953 1188 MobiDBLite consensus disorder prediction 104 128 - -
Prci7g1953 1188 PANTHER MYOSIN 227 662 - -
Prci7g1953 1188 MobiDBLite consensus disorder prediction 87 103 - -
Prci7g1953 1188 MobiDBLite consensus disorder prediction 1064 1092 - -
Prci7g1953 1188 ProSiteProfiles Myosin motor domain profile. 234 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 181 230 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 FunFam Myosin heavy chain 417 473 - -
Prci7g1953 1188 Gene3D - 663 740 - -
Prci7g1953 1188 ProSiteProfiles IQ motif profile. 857 882 IPR000048 GO:0005515
Prci7g1953 1188 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Prci7g1953 1188 SMART iq_5 875 897 IPR000048 GO:0005515
Prci7g1953 1188 SMART iq_5 852 874 IPR000048 GO:0005515
Prci7g1953 1188 SMART iq_5 910 932 IPR000048 GO:0005515
Prci7g1953 1188 Gene3D - 784 852 - -
Prci7g1953 1188 CDD MYSc_Myo8 248 839 IPR036022 -
Prci7g1953 1188 ProSiteProfiles IQ motif profile. 911 940 IPR000048 GO:0005515
Prci7g1953 1188 SMART MYSc_2a 228 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 Coils Coil 973 1007 - -
Prci7g1953 1188 Gene3D Kinesin motor domain 741 783 IPR036961 -
Prci7g1953 1188 Gene3D Kinesin motor domain 233 604 IPR036961 -
Prci7g1953 1188 Gene3D Myosin VI head, motor domain, U50 subdomain 474 582 - -
Prci7g1953 1188 Gene3D - 417 473 - -
Prci7g1953 1188 Gene3D - 605 662 - -
Prci7g1953 1188 MobiDBLite consensus disorder prediction 47 61 - -
Prci7g1953 1188 Pfam Myosin head (motor domain) 236 662 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci7g1953 1188 MobiDBLite consensus disorder prediction 47 130 - -
Prci7g1953 1188 Pfam IQ calmodulin-binding motif 857 873 IPR000048 GO:0005515
Prci7g1953 1188 Pfam IQ calmodulin-binding motif 912 930 IPR000048 GO:0005515
Prci7g1953 1188 Gene3D - 856 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1953 Prci-Chr7 33900048 33910569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1953 28 1182 Myosins gene family AT5G54280 57.708 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1953 K10357 - qsa:O6P43_029040 1562.36