Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1947 ATGAACGAGAAGGCTAACGTGTCTAAGGAGCTCAACGCCAAGCATAAAAAGATACTGGAAGGACTTCTTAAATTACCAGAAAATAGGGAGTGTGCTGATTGCAAAGCTAAAGGACCGAGATGGGCTAGTGTGAACTTAGGCATCTTTATATGCATGCAGTGCTCAGGAATACATCGAAGTCTAGGAGTACATATATCAAAGGTGCGTTCTGCAACTTTGGACACTTGGCTCCCAGAGCAGGTTGCCTTCATTCAATCAATGGGAAATGAAAAGGCAAATAGTTACTGGGAATCAGAGTTACCCCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGCGCAAAATATGAAGAGAAGAGATGGGTAGCAAAGGATGGGAAACCAAAATCACCTTCTAGACTGCAGGGAGACAATGCCTCTTCGCATTGGCAGAGGCCTGCAGAAAGAACGCATGGTTCTCATGCATCTGCTTCTGAGAATACTTTTGAGGAAAGGAAGAAAATTCAGCCATCAAATACAGCTCCTGCTGCTAAATTCACTGTTTCCGCTCCCCCAAAAGGACCTCAGCTGGCAATACCCATCATAAAACCCCAGCAAGTTGAGAAAGTGGAAGCAGTCACACCACAACCTCAAGCTGAGACGACAAAGCCAGCTACTGATATGCCTCAGAGTACCCCTGCAAAAGTTGACTTTGCTACGGATCTGTTTGACATGTTGTCTGTGGATGGCCCAAGTGAAAATGGTTCAGATGCTGCTGCTGCTGCTGCAGCTGATGATAATAACTGGGCAGGTTTTCAGTCTGCTGCTACAGAAGCGTCAAGAGCAGAGAAGACCGGTCCCACAAAAGCAGTTGAGAGTACTCCACCTGCTTCCGGAATTGAGGATCTATTTAAAGATTCATCTTCACCTTCGGTGACACCAAGCTTAGTTCCAGAAAAACAACAGAAAGATGTAAAAAATGATATAATGAGCCTCTTTGAGAAGTCCAGTATGGTGTCTCCATTTGCAATGCACCAACAACAACTTGCCATGCTGGCACAGCAACAGTCCCTTCTAATGGCTGCCGCGGCTAAATCTGCTGGCGGGGACCCCAAGAATCTTGGTAGTTTACAACAATCTGGAGTGAATGGGTCCAATGTTGCTGTACAAAGTTGGCCAGGTGTTGGCTACTCTATTCCTGGAGTTGTGCCAATGCCTGATCAGGCTGAGCTATTGAAACTCATGCAGACTGGGAGCATGCCTCCAGCCCAACCTGCAGGAAGTGGTGCTCAATATCCATCCGGTTTCTATATGATGGGACAAGTTGCTCCAGTTAACGGTACAGCAACGCCAGGAGTGAGCAAACCTCAGCCAGCAGCTTCGGCATCATCGACTCCTTCACAGTCGTCGTCAGGAAAGGACTATGACTTTTCCGCTTTAACGCAAGGGATGTTCTCAAAACACTGA 1449 0.4638 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWESELPPNYDRVGIENFIRAKYEEKRWVAKDGKPKSPSRLQGDNASSHWQRPAERTHGSHASASENTFEERKKIQPSNTAPAAKFTVSAPPKGPQLAIPIIKPQQVEKVEAVTPQPQAETTKPATDMPQSTPAKVDFATDLFDMLSVDGPSENGSDAAAAAAADDNNWAGFQSAATEASRAEKTGPTKAVESTPPASGIEDLFKDSSSPSVTPSLVPEKQQKDVKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGDPKNLGSLQQSGVNGSNVAVQSWPGVGYSIPGVVPMPDQAELLKLMQTGSMPPAQPAGSGAQYPSGFYMMGQVAPVNGTATPGVSKPQPAASASSTPSQSSSGKDYDFSALTQGMFSKH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1947 482 CDD ArfGap 19 117 - -
Prci7g1947 482 MobiDBLite consensus disorder prediction 124 191 - -
Prci7g1947 482 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Prci7g1947 482 MobiDBLite consensus disorder prediction 205 223 - -
Prci7g1947 482 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 482 IPR044520 GO:0005096
Prci7g1947 482 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Prci7g1947 482 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Prci7g1947 482 MobiDBLite consensus disorder prediction 134 158 - -
Prci7g1947 482 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Prci7g1947 482 MobiDBLite consensus disorder prediction 270 317 - -
Prci7g1947 482 MobiDBLite consensus disorder prediction 441 482 - -
Prci7g1947 482 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Prci7g1947 482 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Prci7g1947 482 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Prci7g1947 482 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Prci7g1947 482 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Prci7g1947 482 MobiDBLite consensus disorder prediction 205 225 - -
Prci7g1947 482 MobiDBLite consensus disorder prediction 298 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1947 Prci-Chr7 33855639 33862369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1947 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 1.34e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1947 K12486 - gmx:100807561 637.876