Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1925 ATGGGCGTGCCCGAGACAGACCCTCTAGCTCAATTGAGTCTACCTCCGGGTTTCCGGTTTTTCCCGACCGACGAGGAGCTTCTGGTTCAGTATCTCTGCCGGAAGGTGGCCGGCCACCATTTCTCTCTTCAAATCATCGGCGATATTGACCTGTACAAATTTGACCCCTGGGTTCTTCCAAGCAAAGCCATTTTTGGTGAGAAAGAATGGTACTTCTTTAGCCCGAGGGATCGGAAGTACCCGAACGGCTCCCGACCCAACAGGGTTGCCGGGTCTGGGTACTGGAAAGCCACTGGGACCGACAAAATCATCACCACCGCTGGTCGAAAGGTTGGAATAAAGAAAGCTCTCGTTTTCTATGTTGGAAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTCGATTCCTCCCGAAAGAGCGGAAGCACCAGGCTCGATGATTGGGTTCTATGTCGGATATATAAGAAGAATTCGAGCGCCCAGAAGACTGCGCCTATGGTTCCGAGCAGAGAATACGAATACAGTAACGGGTCGTCGTCGTCATCGTCGTCCCACTTGGACGACGTGCTGGAATCGTTGCCAGAAATCGACGACCGGTGCTTCGAGCTGCCACGTGTCAACTCTCTGAAGACGTGGCCGCAGGAGGAGAAGCTGAATCTTCACAATCTGAATGGCGGTAATAATTTCGTGGAGTGGGCCAACCCGGCAGTTCTGAACTCGGTGGCGGAGTTCATTTCCGGGAATCAAACGCAGACCCCATCTCAATCTCAAAGGGTGGTGAATTATAGTTCAATCAGCGACGTGCAGCACGTCCCGTCGATGCCGCGGCTGACTGTGCCGGAAGAGGAGGTCCAGAGCGGATTGAGTAATTCCGGGTTTTATCATCAGGGGTTCGATAACTCATTGACCGACCCGTATGGGTTCAGGTACCCGAATCAGACAACGGGGTTCGGGTTCAGGCAATGA 984 0.5305 MGVPETDPLAQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLQIIGDIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKSGSTRLDDWVLCRIYKKNSSAQKTAPMVPSREYEYSNGSSSSSSSHLDDVLESLPEIDDRCFELPRVNSLKTWPQEEKLNLHNLNGGNNFVEWANPAVLNSVAEFISGNQTQTPSQSQRVVNYSSISDVQHVPSMPRLTVPEEEVQSGLSNSGFYHQGFDNSLTDPYGFRYPNQTTGFGFRQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1925 327 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Prci7g1925 327 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Prci7g1925 327 MobiDBLite consensus disorder prediction 178 194 - -
Prci7g1925 327 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Prci7g1925 327 MobiDBLite consensus disorder prediction 168 194 - -
Prci7g1925 327 FunFam NAC domain-containing protein 72-like 23 167 - -
Prci7g1925 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 244 - -
Prci7g1925 327 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1925 Prci-Chr7 33671156 33672783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1925 1 254 NAC Transcription Factor Family AT4G27410 69.231 1.51e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1925 NAM 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1925 - - qsu:112022199 453.751