Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1896 ATGAGGTCGAAATCGAGGCTTCGTCGGAGAACTTTTGTCCGGCCATCGGTTTCTCTATCTAATGCTGAACCCAGCCGCTTCTTCAAGATTATACTTTCCGGAACGATTCATACTCAAGACATGGATGTGCCGGCTTTATTTTGGAGAGATTATATGGGAAAACTTGGTCCTATAAAGCTGCAGGATTCTACTGGACAAAAATGGTCGATCAATCTTCGTAGATACACGGGATCAATCAGAATAGGGAAGGGTTGGATCGGTTTCGCCAGGGCCAACAATGTGAAGGAAGGAGACGTGTGTGTTTGA 306 0.4542 MRSKSRLRRRTFVRPSVSLSNAEPSRFFKIILSGTIHTQDMDVPALFWRDYMGKLGPIKLQDSTGQKWSINLRRYTGSIRIGKGWIGFARANNVKEGDVCV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1896 101 SUPERFAMILY DNA-binding pseudobarrel domain 21 101 IPR015300 -
Prci7g1896 101 CDD B3_DNA 26 101 IPR003340 GO:0003677
Prci7g1896 101 Gene3D - 18 101 IPR015300 -
Prci7g1896 101 ProSiteProfiles B3 DNA-binding domain profile. 58 101 IPR003340 GO:0003677
Prci7g1896 101 Pfam B3 DNA binding domain 28 101 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1896 Prci-Chr7 33522906 33525005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1896 26 97 B3 DNA Binding Superfamily AT4G01580 34.247 5.71e-07 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci7g1896 B3 1.5e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1896 - - pcin:129315065 106.301