Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1895 ATGAGAATCCCAAACGAGTTTGTAAGAAGATTTGAGAATGGACTGTCTAGTGAGGCAACAATTGGTGTTCCAGATGGTCTTGCTTGGAAAATGGAACTGGAGAAATCGGAAAACGAGGTTTGCTTCTGCAAAGGTTGGCAGGAGTTTGTGAAATACTACTCTATTAGTTTTGGCTTCTTTCTTGTGTTTAAGTATGAAGGCAATTCACAGTTCAGTGTGGTGATCTTTGATGTGAGTGGCGCTGAGATTACTATCCATGCAAAACTAACTTTGAGAAGCAGAACTCGGCATCTGAACGCCATAGGAAAAGGTCATCCAGCTTTGATCACAGTGGCTACAACACAAGGAGCAAGAAACATAAGCTGGAAGATCAAGAAGAAATAA 384 0.4115 MRIPNEFVRRFENGLSSEATIGVPDGLAWKMELEKSENEVCFCKGWQEFVKYYSISFGFFLVFKYEGNSQFSVVIFDVSGAEITIHAKLTLRSRTRHLNAIGKGHPALITVATTQGARNISWKIKKK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1895 127 Pfam B3 DNA binding domain 1 77 IPR003340 GO:0003677
Prci7g1895 127 PANTHER B3 DOMAIN-CONTAINING 2 85 - -
Prci7g1895 127 CDD B3_DNA 1 77 IPR003340 GO:0003677
Prci7g1895 127 Gene3D - 1 80 IPR015300 -
Prci7g1895 127 ProSiteProfiles B3 DNA-binding domain profile. 1 79 IPR003340 GO:0003677
Prci7g1895 127 SMART B3_2 1 79 IPR003340 GO:0003677
Prci7g1895 127 SUPERFAMILY DNA-binding pseudobarrel domain 1 80 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1895 Prci-Chr7 33520191 33521786 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1895 1 98 B3 DNA Binding Superfamily AT3G18990 44.898 1.03e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci7g1895 B3 2e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1895 - - pcin:129315137 260.766