Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1894 ATGGAAGCTGCCCAGAATTTCAAACCAGAAAATCCATCTTTTACTGCATTAATAGGGCGAAGAAATCTGACTCGTCGTTATCTGAATGTGCCGGCTTTATTTTGGAGAGTTCATGTGGGAAAAATTAGTCCTATGAAGCTGCAGGATTCTAATGGACAAAAATGGGCGATCAATTTTCACAGAGCAGGCGCCGGATCAATCAGAATAGGGAAGGGTTGGATCCGTTTCGCCAGGGCCAACGGTGTGAAGGAAGGAGACGTCTGTGTGTTTGAGCTTATCAGGAGGAAGAACTTTGGATTTCGAGTTACCATATTTGCCTCTTGA 324 0.4444 MEAAQNFKPENPSFTALIGRRNLTRRYLNVPALFWRVHVGKISPMKLQDSNGQKWAINFHRAGAGSIRIGKGWIRFARANGVKEGDVCVFELIRRKNFGFRVTIFAS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1894 107 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 2 106 IPR044837 -
Prci7g1894 107 ProSiteProfiles B3 DNA-binding domain profile. 13 107 IPR003340 GO:0003677
Prci7g1894 107 Pfam B3 DNA binding domain 21 105 IPR003340 GO:0003677
Prci7g1894 107 Gene3D - 1 107 IPR015300 -
Prci7g1894 107 CDD B3_DNA 12 105 IPR003340 GO:0003677
Prci7g1894 107 SMART B3_2 14 103 IPR003340 GO:0003677
Prci7g1894 107 SUPERFAMILY DNA-binding pseudobarrel domain 7 105 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1894 Prci-Chr7 33519922 33520310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1894 3 105 REM Transcription Factor Family AT1G49480 36.190 4.95e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci7g1894 B3 4.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1894 - - pcin:129316768 222.631