Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1893 ATGAGGTCGAGGCGTCGCCGGAGAAGGAGAACCTTTGTCCGGCCATCGGTTTATTCAGCTAATGCTGTACCCAGCCACTTCTTCAAGATCATACTTCCCGGAACGATTCATAGCCAAGACATGAGAATTCCAAAGGAGTTTGTAAGAAGATTTGAGAATGAACTGGCTTGTGATGCAACGATTGGTGTTCCGGATGGCCTTGCTTGGAAAATGGAACTGGAGAAATCTGAAAACGAGGTTTGCTTTTGCAAAGGTTGGCAGGAATTTGTGAAATACTACTCTATTAGTTTTGGCTTCTTTCTTGTGTTTAAGTATGAAGGCAATTCACAGTTCAGTGTGGTGATCTTTGATGTGAGTGGAGCTGAGATTTACTATCCATGCAAAACTAACTTTGAGAAGCAGAACTCGGCATCTGAACGCCATAGGAAAAGGTCATCCAGCTTTGATCACAATGGCTACAACACGAGGAGCAAGAAGCATAAGCTGGAAGATCAAGAAGAAATAATTGATGTAGACGATGACAATGTATTGAACCACGGTAAATCGGGAAACAAAGATAGATCCGGGCAAGAAATAGAGTCCTCAAGAAATCATGAGAAAGAGAAAGATAGATCTAGGCAAAGACGTTGTTCCAAAATGAAGAACACCTTGAGAAGAAAGCAAAGTGCCATGGAAGCTGCCCAGAATTTCAAACCAGAAAATCCATCTTTTACTGCTATAGTAAGGCCAAGTAATCTGACTTGTCGTTATCTGGATGTACCGATTTCATTTTGGAGAGCTTATGTGGGAAAACTTGGTCCTATGAAGCTGCAGGATTCTAAGGGACAAAAATGGGCGATCAATTTTCATAGGCTACACCCGGGATCTATCCGAATATGGAAGGGTTGGATCGGTTTCGCCAGGTCCAACAGTGTGAAGGAAGGAGACGTCTGTGTGTTTGAGCTTATCAAGAGGAAGAACTTTGTATTTCAAGTTACCGTATTTGCCTCTTGA 993 0.425 MRSRRRRRRRTFVRPSVYSANAVPSHFFKIILPGTIHSQDMRIPKEFVRRFENELACDATIGVPDGLAWKMELEKSENEVCFCKGWQEFVKYYSISFGFFLVFKYEGNSQFSVVIFDVSGAEIYYPCKTNFEKQNSASERHRKRSSSFDHNGYNTRSKKHKLEDQEEIIDVDDDNVLNHGKSGNKDRSGQEIESSRNHEKEKDRSRQRRCSKMKNTLRRKQSAMEAAQNFKPENPSFTAIVRPSNLTCRYLDVPISFWRAYVGKLGPMKLQDSKGQKWAINFHRLHPGSIRIWKGWIGFARSNSVKEGDVCVFELIKRKNFVFQVTVFAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1893 330 MobiDBLite consensus disorder prediction 135 216 - -
Prci7g1893 330 ProSiteProfiles B3 DNA-binding domain profile. 236 330 IPR003340 GO:0003677
Prci7g1893 330 SUPERFAMILY DNA-binding pseudobarrel domain 25 120 IPR015300 -
Prci7g1893 330 ProSiteProfiles B3 DNA-binding domain profile. 26 119 IPR003340 GO:0003677
Prci7g1893 330 SUPERFAMILY DNA-binding pseudobarrel domain 230 328 IPR015300 -
Prci7g1893 330 CDD B3_DNA 235 328 IPR003340 GO:0003677
Prci7g1893 330 MobiDBLite consensus disorder prediction 135 210 - -
Prci7g1893 330 CDD B3_DNA 26 117 IPR003340 GO:0003677
Prci7g1893 330 Gene3D - 19 120 IPR015300 -
Prci7g1893 330 SMART B3_2 27 119 IPR003340 GO:0003677
Prci7g1893 330 SMART B3_2 237 329 IPR003340 GO:0003677
Prci7g1893 330 Gene3D - 215 330 IPR015300 -
Prci7g1893 330 PANTHER B3 DOMAIN-CONTAINING 24 323 - -
Prci7g1893 330 Pfam B3 DNA binding domain 27 117 IPR003340 GO:0003677
Prci7g1893 330 Pfam B3 DNA binding domain 238 328 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1893 Prci-Chr7 33515830 33518097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1893 23 328 B3 DNA Binding Superfamily AT3G18990 32.295 8.67e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci7g1893 B3 1.5e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1893 - - pcin:129315065 656.751