Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1874 ATGGAGTCTCGTTTACCTCTCCCCCTTCTCCTCCTTACTCTCTCCCTCCTCTCTCTCTCCCATGCTCGTAACTTCTACGCTGGTAATCGAGATGGTTGGGTCTTGAACCCCTCCGAGAGTTACACCCAATGGTCTTCTCGCAACAGATTTCAGATCAATGACGTTCTCATATTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAACAAGGAGGATTACGACAAGTGTAACACCAAGAACCCCATCAAAAAGTTTGAAGATGGCGATTCGCAGTTCACGTTTGATCGATCCGGACCTTTCTACTTTATCAGTGGACATGATGGGAATTGTGAGAAGGGTCAGAAGTTGACTGTTGTTGTCTTGTCTGTCCGATCATCACGGCCCGGAATGCCTCCGGCACCTCCCTCTACTCCCAAAGCTCCTTCTCCTTCTGGTGGGGGAACCCCCGTTTCACCTCCTGGCTCTCCGGTGACCACTCCTACCGTGCCCTCCCCGTCCGGTAACCCTCCGCCGTCCACCCCGTCAACTCCATCACCGGGAACTTCTCCCAAAGCTCCTGCTCCTTCTGGTGGAGGAACCCCTGTTTCACCTCCCGGCTCTCCAGTGACCACGCCTACCGTGCCTTCCCCGTCCGGTAACCCTCCGCCGTCCACCCCAGCATCTCCATCACCGGAAACTTCTCCCAAAGCTCCATCCACCTCGCCCTATCCACCATCTCAGGCACCGGGAGGCTCTATGACGACGCCATCTCCAGGGAACAGTCCTCCGGTCACTTCACAGCCACCGGCCTACGCACCTGGACACTCGACTCCGGTGGGTAATTCTCCATCCACGACACCATCTTCACCCACTATGGCGCCGGCCAATGCGCCAGGACAATCATCTCCGGTGGGTAATTCTCCATCCATGACACCGTACCCACCATCTATGGCTCCGGGAGGATCTCCGACGGGAACGTCTCCAATGGGCAGTCCTCCGATGGGTTTGGTGTCACCGGCGATGTCTCCATCAGTCTTATCTCCTGCTACTTCACCAGCATCATCGTCGCCTATGGCATCCCCGCCGGAACCCACCGAAACCACCCCATCACCGTCGTCTTCGACCGTCCCAGGATCACCATCCGGTTCACCGGCGTTGGGCCCTGCAGGAGGTTCTACAGCACCCTCAGTGTCCAACGAGGCGACACCGCAACCATCATCAGCATGGCCTGAAACTGCTCCGAAGTTGTTGGTATATGCGGTTACTATGATGGTCGGTGCTGCTCTCGGTACCATTTTTGGTGCTAATAAGAAAACATGA 1305 0.5609 MESRLPLPLLLLTLSLLSLSHARNFYAGNRDGWVLNPSESYTQWSSRNRFQINDVLIFKYQKGSDSVLEVNKEDYDKCNTKNPIKKFEDGDSQFTFDRSGPFYFISGHDGNCEKGQKLTVVVLSVRSSRPGMPPAPPSTPKAPSPSGGGTPVSPPGSPVTTPTVPSPSGNPPPSTPSTPSPGTSPKAPAPSGGGTPVSPPGSPVTTPTVPSPSGNPPPSTPASPSPETSPKAPSTSPYPPSQAPGGSMTTPSPGNSPPVTSQPPAYAPGHSTPVGNSPSTTPSSPTMAPANAPGQSSPVGNSPSMTPYPPSMAPGGSPTGTSPMGSPPMGLVSPAMSPSVLSPATSPASSSPMASPPEPTETTPSPSSSTVPGSPSGSPALGPAGGSTAPSVSNEATPQPSSAWPETAPKLLVYAVTMMVGAALGTIFGANKKT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1874 434 MobiDBLite consensus disorder prediction 127 405 - -
Prci7g1874 434 CDD OsENODL1_like 23 123 IPR041846 -
Prci7g1874 434 MobiDBLite consensus disorder prediction 130 246 - -
Prci7g1874 434 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Prci7g1874 434 MobiDBLite consensus disorder prediction 272 302 - -
Prci7g1874 434 PANTHER BLUE COPPER PROTEIN 24 203 IPR039391 GO:0009055
Prci7g1874 434 FunFam Early nodulin-like protein 1 22 127 - -
Prci7g1874 434 MobiDBLite consensus disorder prediction 387 404 - -
Prci7g1874 434 Gene3D - 21 128 IPR008972 -
Prci7g1874 434 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Prci7g1874 434 SUPERFAMILY Cupredoxins 21 123 IPR008972 -
Prci7g1874 434 PRINTS Proline rich extensin signature 133 154 - -
Prci7g1874 434 PRINTS Proline rich extensin signature 196 221 - -
Prci7g1874 434 PRINTS Proline rich extensin signature 173 190 - -
Prci7g1874 434 PRINTS Proline rich extensin signature 156 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1874 Prci-Chr7 33388908 33390552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1874 1 283 Phytocyanin Superfamily AT4G27520 45.105 4.41e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1874 - - pcin:129315024 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1874 7 33388908 33390552 Prci7g1874 7 33388908 33390552 ECH