Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1862 ATGGATAGCTACTACCATGTCGATAACGGTGATGCTCATTTGCCTCCTGGGTTTCGCTTTCACCCGACTGACGAGGAGCTCATTACCTTCTACCTCCTCAAGAAGGTTCTGGACAACAGCTTCACAGGCAGAGCTATTGCTGAAGTTGATCTTAACAAGTGTGAGCCGTGGGAGCTTCCTGAGAAAGCGAAGATGGGGGAGAAGGAGTGGTACTTCTTCAGCCTCCGAGACCGAAAGTACCCGACTGGCCTGCGCACTAATAGGGCTACAGAGGCTGGATACTGGAAGGCCACTGGAAAAGACAGGGAGATTTACAGCTCCAAAACTTGCTGTCTCGTTGGTATGAAGAAGACCCTAGTTTTTTACCGAGGCAGAGCTCCCAAAGGCGAGAAGAGCAACTGGGTGATGCATGAGTACCGCCTTGAAGGCAAATTTGCTTATCATTACCTTTCACGCAGCTCCAAGGATGAATGGGTCATCTCGCGTGTTTTCCAGAAGAGTCTCTCCTCGGGGACAGGCGGCTCCACCGTATCCTCCGCCGGCGGCTCCAAGAAGACAAACGCAAGAATGAGCTCTTCTGTTAACATGAGCCTTTACCCTGCCAATTCTCCGTCCTCCATCTACCTTCCTCCCTTGCTTGACTCCTCGCCCTACACCGCCGCCAACGACCGTGATAGCTGCTACGATGGTAGCAGCACAACTCCGAGGGAGCACGTGTCCTGTTTCTCCACATACTCTGCGTCCGCTGCCGCCAACAACCTCGCCAATGTTAGCTATGACCTCGCTCCTCCTCTGCCGCCGCCGCCACCGATGACTCTGGATCCATTTGCTCGATTCCAGAACAACGTTGGTGTTCCTGCCTTCCCGAGCCTGAGGTCACTGCAGGAGAATCTTCAACTGCCTTTCTTGTCTCCGGCCATAACTCATGGTGGCTCCGGTGTTGACATGAACGGATGGACTAAGCCGGAGGAGGAGAGTGTGGCGAGTGGCGGTTCTGGCATGGCGCTGTGCCCGTCGGAGCTTGATTACGTGTGGGGAGGCTGCTAG 1047 0.5444 MDSYYHVDNGDAHLPPGFRFHPTDEELITFYLLKKVLDNSFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCCLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSLSSGTGGSTVSSAGGSKKTNARMSSSVNMSLYPEXNSPSSIYLPPLLDSSPYTAANDRDSCYDGSSTTPREHVSCFSTYSASAAANNLANVSYDLAPPLPPPPPMTLDPFARFQNNVGVPAFPSLRSLQENLQLPFLSPAITHGGSGVDMNGWTKPEEESVASGGSGMALCPSELDYVWGGC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1862 349 FunFam NAC domain-containing protein 100-like 23 170 - -
Prci7g1862 349 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Prci7g1862 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 224 - -
Prci7g1862 349 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Prci7g1862 349 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Prci7g1862 349 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1862 Prci-Chr7 33287806 33289859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1862 4 346 NAC Transcription Factor Family AT5G53950 54.762 7.79e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1862 NAM 1.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1862 - - pcin:129313031 483.411