Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1842 ATGGGTGGTGAACTAAGGAAGAAACCGAAACCCGCGCAGCTCAATCCCAACTGGATTCAACTCCAACAGAAGCTCAAAATTCGTGGCTCTGATGCTTCAAGACCCTTCAAAAACTCAGAAACTGAGACCCCAAACTCAATATTGGGGAAGCGGAAGGAGAGACAAGATGCAGAGTCCAATGATTGTCAGATCAATCCTCTTACTCCTGTAAATGATGATTCCAGTCTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACACTGGTTAATAGGTGGGGAAATGTTATTTATGATGAATTTGTTCGACCAGTGGAGCGTATTGTTGACTTTCGCACCAAAATTAGTGGTATAAGACCTCGGGACTTGAGAAAAGCAAAGGATTTTTGGGCCGTTCAGAAGAAAGTAGCAGAGTTAATCAAAGACAGGATCCTTGTGGGACATGCCCTGCACAATGATCTTAAGGCATTATTATTAAGTCATACCAAGAAGGATATTCGGGATACGTCTGAGTACCAACCATTTCTAAAATCGCATAGTAAAAGAGCACTTCGACATCTTGCTGCAGAACATCTTGGTGCTAAGATCCAAACTGGGGAACACTGCCCTATAGAAGATGCTCGTGCTGCTATGCTGCTTTATCAAAGGAATAGAAAAGAGTGGGAGAAGAGTGTGAAAGATCAAGTTCGAATTAAACAGAAGCAGAAGAAACGGAGGCCGAAGAAGAAGCACAAGAAGCAAGTTTCTTTGGATGGGAATGCTGCGGGAGTTGCATCATAG 819 0.4359 MGGELRKKPKPAQLNPNWIQLQQKLKIRGSDASRPFKNSETETPNSILGKRKERQDAESNDCQINPLTPVNDDSSLTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNVIYDEFVRPVERIVDFRTKISGIRPRDLRKAKDFWAVQKKVAELIKDRILVGHALHNDLKALLLSHTKKDIRDTSEYQPFLKSHSKRALRHLAAEHLGAKIQTGEHCPIEDARAAMLLYQRNRKEWEKSVKDQVRIKQKQKKRRPKKKHKKQVSLDGNAAGVAS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1842 272 Pfam Exonuclease 80 227 IPR013520 -
Prci7g1842 272 SUPERFAMILY Ribonuclease H-like 79 228 IPR012337 -
Prci7g1842 272 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 43 248 IPR047021 GO:0004527
Prci7g1842 272 FunFam Interferon-stimulated exonuclease gene 20 75 246 - -
Prci7g1842 272 Gene3D - 75 255 IPR036397 GO:0003676
Prci7g1842 272 SMART exoiiiendus 78 236 IPR013520 -
Prci7g1842 272 MobiDBLite consensus disorder prediction 243 259 - -
Prci7g1842 272 MobiDBLite consensus disorder prediction 27 70 - -
Prci7g1842 272 MobiDBLite consensus disorder prediction 237 272 - -
Prci7g1842 272 Coils Coil 217 237 - -
Prci7g1842 272 CDD REX4_like 80 228 IPR037431 GO:0006364|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1842 Prci-Chr7 33195637 33199785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1842 79 233 C2H2 Transcription Factor Family AT5G40310 36.257 4.77e-28 108