Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1818 ATGTGTTGCTTGCATCTCCCTTGCTTCTCAGAGAAATGTCTTCTCCGACCAGCTCGGTTATCTTTCTCTTGCCGCCGCCGCCTTTTTGCCACCGCGTCCTCGGTTTCCGGTGCCACTAAGAAGGAGAATAAAGAGAAGGTCATAGTCATTTCTGGTCCCACAGGGTCTGGTAAAAGCAGGCTTGCTTTAGAGCTCGCGAAGCGCCTCAATGGCGAAATTATCAGTGCGGATTCTGTCCAGGTATACCAGGGTCTTGATGTTGGATCAGCAAAGCCATCCAAAATTGATAGAAAGGAGGTGCCACATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATTCTTGACAACAGTCATGTTCCTATTGTCGTTGGGGGGACTGGATTGTACTTAAGATGGTTCATTTATGGAAAGCCTGAGGTCCCCAAAGCCTCTCAAGAGATTACATCTGAAGTGTATTTGGAGTTAGCTGAATTACAGAGGAACGGAAAATGGGATGCAGCTGTGCGGTTGGTTGTAGAAGCAGGTGACCCGAAGGCCCAATTTATAACTCCCAATGATTGGTACCGATTACGACGTAGCCTTGAGGTTATTAAGTCTAGTGGATCACCTCCATCTGCTTTTCGGGTACCATATGATTCTTTTAGGGAACAAGGAGATTCTAGTGTTGTGGACAACTCTGACTATTCTGATGTCAATGCTACTGGTGATGGAATGAAAGTAACATCCTCAGATTTGGACTACGAGTTCATTTGTTTTTTCCTTTCTACACGAAGGCTTGACCTCTATAGATCAATTGATTATCGCTGTGAAGATATGCTATTAGAGAGGGATGGGATATTGTCTGAGGCTCAATGGCTTCTTAATATTGGTCTTCATCCAAATTCAAATTCTGCAACAAAAGCAATTGGTTACAGGCAGGCCATGGACTACTTAGTAAGATGCAGACAGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCAGTTTTTTAACTGAATTTCAAAAGGCGTCTAGGAATTTCGCCAAAAGACAATTGACATGGTTTCGAAATGAACATATATACCACTGGCTTGATGCTTCTAAACCTCTGGACACTATTCTAGACTTCATCTATGAATCTTACCATGATAAGAGTGGAACTCTCATTGTTCCCGAACACTTGAGAATGTCTAGAGATGTTTCTAATGGTCGAGAAGCTAATGACCTCAAGGTCTACCGCCCCCAAAATAGGCTTTTCTTGAATAAAGAAGATTGCTTTCCTGTTCTGAACTGGATGAAAACTCAAGTCTGA 1341 0.4303 MCCLHLPCFSEKCLLRPARLSFSCRRRLFATASSVSGATKKENKEKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQGLDVGSAKPSKIDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRCILDNSHVPIVVGGTGLYLRWFIYGKPEVPKASQEITSEVYLELAELQRNGKWDAAVRLVVEAGDPKAQFITPNDWYRLRRSLEVIKSSGSPPSAFRVPYDSFREQGDSSVVDNSDYSDVNATGDGMKVTSSDLDYEFICFFLSTRRLDLYRSIDYRCEDMLLERDGILSEAQWLLNIGLHPNSNSATKAIGYRQAMDYLVRCRQQGGQSSVREFFSFLTEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLDTILDFIYESYHDKSGTLIVPEHLRMSRDVSNGREANDLKVYRPQNRLFLNKEDCFPVLNWMKTQV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1818 446 Hamap tRNA dimethylallyltransferase [miaA]. 47 385 IPR018022 GO:0008033
Prci7g1818 446 FunFam tRNA dimethylallyltransferase 9 155 226 - -
Prci7g1818 446 Gene3D - 155 226 - -
Prci7g1818 446 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 377 IPR039657 -
Prci7g1818 446 Pfam IPP transferase 80 368 - -
Prci7g1818 446 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 47 224 IPR018022 GO:0008033
Prci7g1818 446 Gene3D - 44 433 IPR027417 -
Prci7g1818 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 171 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1818 Prci-Chr7 33080578 33088240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1818 50 347 C2H2 Transcription Factor Family AT2G27760 27.778 2.21e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1818 K00791 - qsa:O6P43_029165 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1818 7 33080578 33088240 Prci7g1818 7 33080578 33088240 ECH