Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1813 ATGGGATCACCATTCAAGCCAGTTTCATGTCCCAGAAAAACCCCATTTAGAATAGAAACCAAGAACTTGTCATGCAGATTGCGCAGCCAACTTGATGAATTTAGAAGCCTGTGTTTTGGTTCGAGTCCAGGGAGACGTGCTAAGCTGATCTTGAAAGATGTGAATTGTGAGGCAAAACCTGGAGAACTAACGGTCATTGCTGGTCCTAGTGGAGCTGGAAAGACCACACTGCTAGAGATTCTTGCAGGGAGAATATCCCCGTGCGAGGTTTCAGGGCAAGTGCTTGTCAATCATAGGCCTATGGACTTGGAGCAATTTAGAAGAACATCTGGGTATGTCACACAAGAAGATACTCTGTTCCCTTCGCTTACAGTTAGAGAAACACTCATGTATAGTGCCCTTCTGAGGCTTCCTGGAGGTAGAAAAGTGGCTGGTGCAAGAGTTGCAGAGTTGATAAAGGAGCTTGGGTTAGATCACATCGCTGATTCAAGAATTGGTACTGGTTGCGGTGGATCGTCAAACCAAGGCATATCGGGTGGGGAAAGGCGAAGAGTTTCCATCGGAGTTGATTTGATTCATGACCCTGCAGTTATTTTGATTGATGAGCCTACTTCAGGTTTGGATTCAGCATCTGCGCTGAACATAGTATCGGTGCTTAAATTAATGGCATTTAACCAAGGTAAGACCATCGTTTTAACCATTCACCAACCTGGGTTTCGGATTTTACAGCTAGTTGATCATCTTGTTTTGCTTTCGGATGGATTCGTCATGCATAATGGGTCATTGAACCTACTTGAGGCTAGGCTCAAGTTGGCTGGGCATCATATTCCCCACCATGTCAATGTCCTTGAATTTGCCCTCGATGTCATGGGAAGCTTGGTAATACAAACTTCAGAATCCATGAACAATCAGTTTCTTCTCAGAGACAGAGAGGAGCAAGTTTGTAAATTGAGGATGCCGTGCTCAATGAATGTCAAAGAAAAGGCTCTTCAGTACCCAAATTCTCCAGCGGAGGAGATTCTAATCCTAGGACAAAGGTTTTGCCGCAACATATTCAGAACCAAGCAACTGTTTATCACCAGAGTCATACAAGCCTTGGTAGCTGGATTTATACTAGGGACTATATTTTTTAATGTTGGCAACAGAAAAGGCCAAGTTGCCTTACAGACACGAAGTGGATTTTTCGCTTTCAGCCTTACTTTTTTGTTATCTTCAACAACAGAAGGCCTGCCTATTTTCTTGCAAGAGAAAAGGACTTTGATGGAAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTCTAGCAAACACCCTAATGTTTCTTCCTTTCCTTTTAATGGATATTTCATATCAAAGGGAAACATACCCAGATACTGGATTTTTATGCACTATATAA 1401 0.4283 MGSPFKPVSCPRKTPFRIETKNLSCRLRSQLDEFRSLCFGSSPGRRAKLILKDVNCEAKPGELTVIAGPSGAGKTTLLEILAGRISPCEVSGQVLVNHRPMDLEQFRRTSGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKVAGARVAELIKELGLDHIADSRIGTGCGGSSNQGISGGERRRVSIGVDLIHDPAVILIDEPTSGLDSASALNIVSVLKLMAFNQGKTIVLTIHQPGFRILQLVDHLVLLSDGFVMHNGSLNLLEARLKLAGHHIPHHVNVLEFALDVMGSLVIQTSESMNNQFLLRDREEQVCKLRMPCSMNVKEKALQYPNSPAEEILILGQRFCRNIFRTKQLFITRVIQALVAGFILGTIFFNVGNRKGQVALQTRSGFFAFSLTFLLSSTTEGLPIFLQEKRTLMEETSRGAYRVSSYVLANTLMFLPFLLMDISYQRETYPDTGFLCTI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1813 466 Pfam ABC transporter 51 205 IPR003439 GO:0005524
Prci7g1813 466 CDD ABCG_EPDR 41 260 - -
Prci7g1813 466 FunFam ABC transporter G family member 10 35 284 - -
Prci7g1813 466 Gene3D - 21 279 IPR027417 -
Prci7g1813 466 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 449 - -
Prci7g1813 466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 278 IPR003439 GO:0005524
Prci7g1813 466 Pfam ABC-2 type transporter 339 448 IPR013525 GO:0016020|GO:0140359
Prci7g1813 466 SMART AAA_5 60 255 IPR003593 GO:0016887
Prci7g1813 466 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Prci7g1813 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 270 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1813 Prci-Chr7 33045618 33047576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1813 31 265 Calmodulin-binding Proteins AT2G36910 28.571 1.80e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1813 K05681 - gmx:100776372 700.664