Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1811 ATGAGTTGTTTCTCTTGGCTTATCAGAAAAAAAGGATCTGTCTCAGCCACGCAACCTACCGAAATAGATTTTGAGGTTTCAGACATTCAGAATGTGAACCTTTACACCTACAAGGAACTTCGAATTGCTACAGAAGGTTTTAGCCCAGCAAACAAGATAGGGCAAGGTGGTTTCGGATCTGTCTATAAGGGAAAGCTGAGAAATGGGACTCTTGCTGCTATAAAGGTGTTGTCAGCTGACTCGAATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAAGTGATCACGAGCATAGAGCATGAAAACCTAGTTAAGTTGTTTGGATGCTGTGCAGAAGGAGAACACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCCTAGCTCAAACACTTCTTGGTGGAGGCCATAGTAGCATTCAATTCAGTTGGCCTGTGCGGAGGAACATTTGCGTTGGTGTTGCACGGGGCCTAGCATTCCTTCACGAGGAGGTAGAACCACATATTATTCATAGAGACATTAAAGCAAGCAATATACTACTTGATAAAGACTTGCAGCCCAAAATTTCTGATTTTGGTCTTGCAAAGCTTCTTTCTCCAAACCTGACCCATATTAGTACACGTGTTGCTGGAACAGCTGGGTATCTAGCACCTGAGTATGCCATACGAAATCAAGTAACAAGAAGATCAGATGTCTACAGTTTTGGAGTTCTACTGTTGGAAATTGTTAGTGGGAGGTGTAACACAAACAGACGGTTACCTGCTGAAGAACATTATCTTCTTCCAAAGGCATGGACTGTGTATGAAAATGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGATGGCTTCAATGTTGAGGAGGCATGCCAGTTTTGTAAGATCGGTCTTCTCTGCACTCAGGATTCTCCTCAGCTCCGACCATCTATGTCTTCTGTGCTTGGCATGTTGTTGGGCGAAATTGATGTTGATGAAAAGAAAATTACAAAGCCAGGATTGCTGTTTGAGTTTGTAGAAGCCAAAGATGAAAGGATGCAAAAGGTCGAGGCTGAAGAAAATACATCTTCCCTTGGTGTCTATGGGAAGCAAGACGATTCCTCTTTGATGGGAACCACGACCTCTTTTGCTACCATGACCTTCACCTCAATTTATGACCGAACCTATTGA 1170 0.4325 MSCFSWLIRKKGSVSATQPTEIDFEVSDIQNVNLYTYKELRIATEGFSPANKIGQGGFGSVYKGKLRNGTLAAIKVLSADSNQGVREFLTEIKVITSIEHENLVKLFGCCAEGEHRILVYGYLENNSLAQTLLGGGHSSIQFSWPVRRNICVGVARGLAFLHEEVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLLSPNLTHISTRVAGTAGYLAPEYAIRNQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPAEEHYLLPKAWTVYENGELEKLVDALLEDGFNVEEACQFCKIGLLCTQDSPQLRPSMSSVLGMLLGEIDVDEKKITKPGLLFEFVEAKDERMQKVEAEENTSSLGVYGKQDDSSLMGTTTSFATMTFTSIYDRTY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1811 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Prci7g1811 389 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1811 389 Pfam Protein kinase domain 50 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1811 389 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Prci7g1811 389 ProSiteProfiles Protein kinase domain profile. 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1811 389 CDD STKc_IRAK 53 318 - -
Prci7g1811 389 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Prci7g1811 389 FunFam cold-responsive protein kinase 1 18 122 - -
Prci7g1811 389 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Prci7g1811 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 354 - -
Prci7g1811 389 FunFam cold-responsive protein kinase 1 123 334 - -
Prci7g1811 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1811 Prci-Chr7 33041878 33045140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1811 10 329 Receptor kinase-like Gene Family AT1G53420 50.625 2.36e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1811 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1811 - - gmx:100801735 613.609