Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1803 ATGTTACGTAACAAAGAAATAGAGGATTTATGTGATGACAACTTTGAAGGTTCTAATGATGAAAGGCAGATTTTTACTGAGATATTTTTCAGTAAAGATAGTGTTCAGCCTAGTCAGAGGTGTCTTGTTACTGGAGTCATCAACTTTGAATGTGAATCTAGTAAAAACACAAATATTTCACTCTGCTCTAGCAATGAAAACTCAGTCACAAGAAGCCCCTCTTCTTCAAAAGTTACACATTCTGAGGATGATTGTGACGTGATTCAGACTTTGAAAGGGACTGCTCTTGGTTGTATGCCTGATAGATTCAATTATGAAGGCCCAAATCATGAGGATGTAAATGTCAAACGCATGAAATTTTCCCTGCATGAACTTCCCTATAGATCCAATTTCAAAAAGGTTTTGAGTTCACCAAAACTTTCAAAAGAATATGTCACTGACATGGCTGGTGCTGCTATAGACTTTGATAGTAAACCACTTTCACTTCGTTTAGTTGAATCGTCAAAGCATGGTGTGATATCCAGTTGCTATCTGTTGAAGCATAGCATGATGCTGAACAAAAAAAGAGGTAAGGATGATGTAGATGTTTCAAATTGTACAAAAACCACTGTGGATGGAAATTTGGCCAAAGAAGTGTCTACAAGTAAAGCGGCTGCTTCTCCTGTTTCCCAAGAGAGCTTTGCAAATAAGCTTGTAGTAACAAGTCCATTTATCACTGCTATGGAGAAATCTGGATCTCATTTCCAATTTGAGGAGATACCCAAAGGATTTTTATCCTATGATTTGGATAAGTCAAATTTATCATTGACACCAGACCTTAAGAAGGACCCCCGTGATTTATTGCATCACCGTAGCGTGCAGTTGCTTATGATGGCTGGATGGTCTATGGAGAAGCGTAAGAGACCTTGTAGACGCTACTTTGAGTCTATTTATTGGACGCCAGAAGGAAGGCCAGTCCGTGAGTTTATAAAAGCTTGGAGGTTATGTGGTCAGTTTTTGTCAGTCGACAAATACAGTTCAATGCAGGATAGTTGTAAAGAATGGGCTGATTTTGGCCAATTCTGGTCTGATCTATCCCATGCACTGATCAATGTTGAAAAGGAAATAAACCAGTCAGAGTCTGCTGCTATGTTAGCTTATCAATGGTGTCTCCTGGATCCGTTTGTAGTTGTAATTTTTGTTAAAAGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTGAAGGTGACTCGAAGTATAGTTTCTAGAAATTATAGGATGGCATGTACACCCAAAAGTTCAGCTTGGGAGGATTCTCCTGCAATTCCATTTGATCTGAAACATGGGTCAGCTTTTCTTTTTGATTCTGCTACTGCCACTCAGAGCAAACTAACAACATCTTCGCTCAATTACCGTGCCCGTAATCAGAAAACTGGGGATGGAAATAACTTAGGATATGAACAGACAATTAATGGGATGATAAAACTTCCAGTATTTGAATGTAATGGTATTGGTGACAAGGAAGAGATGTACTTAGAGCACAACACTGACAGCACGGTGAATCAATGTAGGAAAGTGTCTGTATATGAAAGGAGCAGACTTGGAAAAGGCTTGTTAACTGATGATGAGATGGGTTTTACTGGTACACAGTCCAGTGCTTGTACTTCCAATGTTACTACAACTTCTGGAAATTCAAATCAGGCATTTAGGGGGCTTAAAATAAACACTTGTCTGGAAAGTAATGTTAGAAATTTTGAAAGCTCTGATGAAAAGTACTTGGAAAATTTGCTGGAAACAGATAAGAGAGTAGCTGGGGATGTGCCAATGGACAAGGCAGAGGAAAAGGATCAATCAGATGGCGAAGTTCAGGATTGTTATGGAAGTCATCTGCGGGAATCCCTGAATAGATATCCACAAGGAGCAAGAGATGGCCTGGTTCATTGTCATGCCTCAGAGGGTGTTCAACAGTCTGAATATGTTGAGGAAGGGTGTGGACAAAGCTCAAGAGCTTCGGTGCTTGAGACAGACAACACATGTTCTACCCATGATGTTATTCTGAAAAAGAAGATACAGAGGAAGTGTAAAAGGGTATCTGAAATTAAACTTAATATGCTATATGAAAGTGACATGATGGGTTTTACAGTTACAGACGACGCCCTATTACCAAGTGGTGGGGTATGTGGTACTCACTTAGGATTTGAAGAGGGTGATCATGTAGCTGATGATGCAGAGGATGGAGGAGCCTGTGGTAAAGTATCATCAATCAGTTTGTTCCAGCAACAACATATTGGGAGTACAAATGCAAAGTTTAGAAAGAGCTGTCATAACTATGACCCTATAACTGAAAAACCAAAGTCTAGTGGATGCCAGATTGCAGATGATGACCTGTTGGTTTCAGCTATTTTTAAGAAAACTGGTTTCATCTCAAAGACAGCTCGAGATCAATCTAAATCTAAATCCTGCAAATCAAAAGCTCAGAGAAAGCTGAGGAGGCAAAAGGGTCACTGCAGGTTGCTACCAAGGAACCTTGGCAATGGGGGGAAGCGCCTTAAGGAAGGCAAGAGGTGTTATCTTGGGGCAAGAACAGTGCTGTCATGGTTGATTGAAAATGGGATCATATCTTTAAATGATGTGATTCAATACCGAAGCCTTAAAGATAATGCTGTCATTAAGGATGGTAGGATTACCAGGGATGGTATTATATGTACGTGTTGCAATAAGTTGCTTACATTATCTGAGTTCAAGTTTCATGCTGGGTATAGATTGGATCGCACCTGCTTGAACCTTTTCATGGAGTCTGATGAGCCCTTTACATTGTGCCTGCTTCAAGCTTGGTCTGCTGAATACAAGGCCAGGAAAAGTGGGAATCAAACTGTAAAAGTTGATGATGACGATGGTGATAAAAATGATGACTCATGTGGATTGTGTGGTGATGGCGGTGAGTTGATATGCTGTGATAACTGTCCATCAGCTTTTCATCTTGCTTGTTTGTCCACTCAGGATATCCCTGAAGGCAACTGGTACTGCACAAACTGCACTTGTGGGATTTGTGAGAATTTTGTCAATGATAAAGAGGCTTCTGGTGCTTGTGATGCATTGCAGTGTTTACAGTGTGAGCAAAAATATCATGGAAAGTGTCTGACTGGAGGCGGTAAACCAGAAGGGGAAGTTTCTGGCAGTTGGTTTTGTGGTGGACTCTGTCAAGAGGTATACTCTGGTCTTCAATCTCGGGTTGGACTTGTTAATCATATTGATGATGGCCTCTCATGGATGCTTCTTAAATGCATCCGGGATGACCAAAAGGTTCATTCTGCCCAGTGGTTTGCCCTCAAGGCGCTATGCAATACAAAATTAGCTGTTGCCCTTACCATCATGGAGGAGTGCTTTTTGTCAATGGTGGATCCTAGAACAGGCATAGACATGATACCCCATGTTTTATACAATTGGGGGTCTGATTTTGCTCGACTGAATTTTCAAGGGTTTTATACTGTGGTATTGGAGAAGCAAGATATCTTAATTTCTGTTGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCACTTATTGCAACTTGCAGTAGGTATCGTCGGCAGGGAATGTGCCGACTCCTTGTGAGTTCAATTGAAGAGATGTTAATATCTGTCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCAGATTTAGTGGAGACTTGGACCAAGGGTTTTGGATTCAGACTTGTAGGTGCTGATGAAAAGCAGAAACTGAACAAAATAAACTTGATGGTTTTTCCTGGGACTGTGTTACTTGAAAAACCCTTGTTCAAGGAAGATAAAACAGAAGATGACCCGGCCAAAGTAGGTGTGTATTGTAAAGGAATGGAGATGGCCGAATCATTGCAGCAAGATGTTGGAGACACCTCTGCAGATGAAATTGGTGCTAAGTCTGACGCTGAACATGTTTGCAGCGAGAATGACCCAGATTACAGAATTGAATCACTGCAGCAGCATGTCCAAAACAATTATACTGATGAACTTAGTGCTAAGTCAGAAACAGAACATGTTTGCAGCAAGAACTTCGCAGATTACAGAGCTGAGTCATCATTAGGATTGAAAGAAACGGCAGATCGGAATACCTATTTAAGCGGAGAGAAGATCATGGGCCTTGTAAAGCAGTGTGATGACTTGCAGAAATATATCAAAGTGAAAAATATGCACGAATTGAGAAACAGCGCCAAACTGGAAGCCACAAATGAGTCCGTACAGCACTCTAGTGAGAACTGTTGCACTAACAGAGATGGTACTGAAATTGAGAAAAGGAATATCAAGGCTGGTGAAGGTCACGAGAATGGCTTGCGGGGCCCCTTTTTGCAGAAGTCCTGCAAGCCAGTATTAGGCAACAATTTTGACGTGGATTCCATAATTGAATCCTCGGGGATGTATGATGAAACACAACTTTCTTTGCAACAGAGTTCGCAGGAAGCATGTGAGATAATGAATGAATGA 4470 0.411 MLRNKEIEDLCDDNFEGSNDERQIFTEIFFSKDSVQPSQRCLVTGVINFECESSKNTNISLCSSNENSVTRSPSSSKVTHSEDDCDVIQTLKGTALGCMPDRFNYEGPNHEDVNVKRMKFSLHELPYRSNFKKVLSSPKLSKEYVTDMAGAAIDFDSKPLSLRLVESSKHGVISSCYLLKHSMMLNKKRGKDDVDVSNCTKTTVDGNLAKEVSTSKAAASPVSQESFANKLVVTSPFITAMEKSGSHFQFEEIPKGFLSYDLDKSNLSLTPDLKKDPRDLLHHRSVQLLMMAGWSMEKRKRPCRRYFESIYWTPEGRPVREFIKAWRLCGQFLSVDKYSSMQDSCKEWADFGQFWSDLSHALINVEKEINQSESAAMLAYQWCLLDPFVVVIFVKRKIGALKKGELVKVTRSIVSRNYRMACTPKSSAWEDSPAIPFDLKHGSAFLFDSATATQSKLTTSSLNYRARNQKTGDGNNLGYEQTINGMIKLPVFECNGIGDKEEMYLEHNTDSTVNQCRKVSVYERSRLGKGLLTDDEMGFTGTQSSACTSNVTTTSGNSNQAFRGLKINTCLESNVRNFESSDEKYLENLLETDKRVAGDVPMDKAEEKDQSDGEVQDCYGSHLRESLNRYPQGARDGLVHCHASEGVQQSEYVEEGCGQSSRASVLETDNTCSTHDVILKKKIQRKCKRVSEIKLNMLYESDMMGFTVTDDALLPSGGVCGTHLGFEEGDHVADDAEDGGACGKVSSISLFQQQHIGSTNAKFRKSCHNYDPITEKPKSSGCQIADDDLLVSAIFKKTGFISKTARDQSKSKSCKSKAQRKLRRQKGHCRLLPRNLGNGGKRLKEGKRCYLGARTVLSWLIENGIISLNDVIQYRSLKDNAVIKDGRITRDGIICTCCNKLLTLSEFKFHAGYRLDRTCLNLFMESDEPFTLCLLQAWSAEYKARKSGNQTVKVDDDDGDKNDDSCGLCGDGGELICCDNCPSAFHLACLSTQDIPEGNWYCTNCTCGICENFVNDKEASGACDALQCLQCEQKYHGKCLTGGGKPEGEVSGSWFCGGLCQEVYSGLQSRVGLVNHIDDGLSWMLLKCIRDDQKVHSAQWFALKALCNTKLAVALTIMEECFLSMVDPRTGIDMIPHVLYNWGSDFARLNFQGFYTVVLEKQDILISVASIRVHGTTVAEMPLIATCSRYRRQGMCRLLVSSIEEMLISVKVAKLVIAAIPDLVETWTKGFGFRLVGADEKQKLNKINLMVFPGTVLLEKPLFKEDKTEDDPAKVGVYCKGMEMAESLQQDVGDTSADEIGAKSDAEHVCSENDPDYRIESLQQHVQNNYTDELSAKSETEHVCSKNFADYRAESSLGLKETADRNTYLSGEKIMGLVKQCDDLQKYIKVKNMHELRNSAKLEATNESVQHSSENCCTNRDGTEIEKRNIKAGEGHENGLRGPFLQKSCKPVLGNNFDVDSIIESSGMYDETQLSLQQSSQEACEIMNE 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1803 1489 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 951 1025 IPR013083 -
Prci7g1803 1489 PANTHER PHD FINGER FAMILY PROTEIN 1 1429 - -
Prci7g1803 1489 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1115 1237 IPR016181 -
Prci7g1803 1489 Pfam PHD-finger 966 1007 IPR019787 -
Prci7g1803 1489 ProSiteProfiles Zinc finger PHD-type profile. 963 1008 IPR019787 -
Prci7g1803 1489 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1101 1263 IPR000182 GO:0016747
Prci7g1803 1489 CDD PHD1_AIRE 966 1005 - -
Prci7g1803 1489 Pfam Tify domain binding domain 886 936 IPR032308 -
Prci7g1803 1489 SMART PHD_3 1007 1060 IPR001965 -
Prci7g1803 1489 SMART PHD_3 965 1006 IPR001965 -
Prci7g1803 1489 SUPERFAMILY FYVE/PHD zinc finger 950 1006 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1803 Prci-Chr7 33014664 33025000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1803 1 412 PHD Transcription Factor Family AT3G14980 35.024 7.61e-51 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci7g1803 TDBD 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1803 - - pcin:129315189 2997.22