Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1799 ATGTCGCATCCTGGGAAGCCCGATTCGGAGCTAGGGTTAGGTGCTCTCAGCGATCGATTTCGCGATTCCCTGAGCTGCGAGGCGAACAAGCCGGATTTTCGCGAACTCGATCTAGGGTCGCCAGTTTCGCCATTGCGGACTCGTCAAAGTGGACGTGGTGCGAGTGGACTCACCACTACTACCAGCAGTAGTTCCAGTTCATCTGGATCGGTTTCTGGGCGCAATGGGTATAACCCGGTCTCGAAAGGATCCGACTCTGGTGCGAACAACCACTCCGGTGAGCTTTCTGGTTCCAGCGAGAGCAGTCCCACTGCCGCCGAGAGCCTTCGATCCGGGGGGAATGCCAGGAACTTCAAACCGGGTCACGCAAGATCCGATGCCGGAACCACCCCGCCTTTTATATATTCGGGTCAGAGCTCATCCGTCACATCACCAGCATTGAATGTTCTTCCTACCGGCAATATCTGTCCGTCTGGCAAGATTCTGAAGACGGGTATGGCGTCCAATCGGACCTCCAGGACGGACGTTTTGGGCTCCGGTACGGCCAATTATGGTCACGGAAGCATAATGCGGGGCTGTGGATCATCCAAACATACTGCCGGAGAGGCGGCAAGTTCGGCCAATGTAAGGGCAACCGGTGCTGGCGGTTTCAAGGAACCGTTCAAGAAAGCGGCGGCGAGTTTGGATCCAGAAGAGGTGAAGAGAGCGGGGAACGAGCACTACAAGAGGGGTAACTTTACAGAGGCACTGAATCTTTATGATCGGGCAATTGGACTGTCCCCTGGTAATGCCGCCTACCGGAGCAACCGTGCGGCTGCATTGACGGCATTGGGTCGGTTGACTGAGGCGGTGAGGGAATGCGAGGAGGCTGTGAGATTGGATTCTAATTATGGAAGAGCACACCAGCGTCTTGCTTCTCTTTTTCTCCGGTTAGGACAAGTTGAGAATGCGAGGAACCACCTATTTGGTCGTGGGCTGCAGCTGGATCCTTCTGAGCTGCAGAAGCTACAATCGGTGGAGAAGAATATCAACAAATGTACTGATTTTCGAAGGAGAGGTGATTGGAAAAGTGTCCTCAGGGAAGTTGATGCTGCTGTTGCTGCTGGAGCAGACTCTTCCCCTCAGCTCTTTATGTGTAGAGCAGAAGCCCTTTTAAAGCTTCACCAAATTGATGATGCTGAATCAATTCTGTCAGCTATTCCAAAAACAGAATCACATTCTAAATCCTCGTCTCAGGCAAGGTTTTTTGGAATGCTTTCTGAAGCTTATTCTTTCTTTGTTAGAGCTCAGATTGAGATGGCTTTGGGAAGGTTTGAGAATGCAGTTGCAGCTGCTGAGAAAGCTGGTCTCATTGATGCCCGAAACATCGAAGTTGCTGTTTTGCTCAGCAATGTAAGGATGGTGGCTAGAGCTCGAGCTCGTGGCAATGATCTTTTTAAATCTGAAAGGTTCACTGAAGCTTGCTCTGCATATGAGGAAGGTTTGAGGCTGGAGCCTTCAAATGCTGTTCTCCATTGCAATAGAGCTGCTTGTTGGTTTAAGCTTGGGCAATGGGAAAGATCAATTGAGGACTGCAATCAAGCTTTACACATCCAACCAAATTATACAAAAGCACTTCTTCGAAGGGCTGCCTCAAATAGCAAGCTAGAGAGGTGGGAAGAAGCAGTCCAAGACTATGAGGTCTTACGAAGAGAACTTCCAGATGACAATGAAGTTGCTGAAGCTCATTTCCATGCACAAGTTGCATTGAAGAAATCTCGTGGGGAAGAAGTTTATAATTTGAAATTTGGTGGCGAAGTGGAAGGAGTATCTGGTCTCGAGCAGTTCAGAGCTGCAATATCTTTACCAGGTGCTTCACTCGTGAGACTTTCATATGGTCAGTTAATTTATCTTGTAAATACAGGGATTGATTGTAACCCCAACTCTGCAGGTGTATCTGTTGTCCATTTTGAAATTGAATCTGACTCACAATGCAAACAGTTATCACCATTTGTGAATACACTTTGCAGTCGATTTCCTTCTGTTAACTTTCTCAAGGTGGATGTTCAAAAAACCCCAGCAATTGCAACCGCTGAGAATGTTAGGTTGGTACCCACTTTCAAGATCTACAAAAATGGCAGCCGTGTGAAGGAACTTGTTTGCCCCAGCCGTGATATGTTGGAACACTCTGTGAGGCATTACAGCACATAG 2190 0.4854 MSHPGKPDSELGLGALSDRFRDSLSCEANKPDFRELDLGSPVSPLRTRQSGRGASGLTTTTSSSSSSSGSVSGRNGYNPVSKGSDSGANNHSGELSGSSESSPTAAESLRSGGNARNFKPGHARSDAGTTPPFIYSGQSSSVTSPALNVLPTGNICPSGKILKTGMASNRTSRTDVLGSGTANYGHGSIMRGCGSSKHTAGEAASSANVRATGAGGFKEPFKKAAASLDPEEVKRAGNEHYKRGNFTEALNLYDRAIGLSPGNAAYRSNRAAALTALGRLTEAVRECEEAVRLDSNYGRAHQRLASLFLRLGQVENARNHLFGRGLQLDPSELQKLQSVEKNINKCTDFRRRGDWKSVLREVDAAVAAGADSSPQLFMCRAEALLKLHQIDDAESILSAIPKTESHSKSSSQARFFGMLSEAYSFFVRAQIEMALGRFENAVAAAEKAGLIDARNIEVAVLLSNVRMVARARARGNDLFKSERFTEACSAYEEGLRLEPSNAVLHCNRAACWFKLGQWERSIEDCNQALHIQPNYTKALLRRAASNSKLERWEEAVQDYEVLRRELPDDNEVAEAHFHAQVALKKSRGEEVYNLKFGGEVEGVSGLEQFRAAISLPGASLVRLSYGQLIYLVNTGIDCNPNSAGVSVVHFEIESDSQCKQLSPFVNTLCSRFPSVNFLKVDVQKTPAIATAENVRLVPTFKIYKNGSRVKELVCPSRDMLEHSVRHYST 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1799 729 Gene3D Tetratricopeptide repeat domain 229 588 IPR011990 GO:0005515
Prci7g1799 729 Pfam Tetratricopeptide repeat 236 296 - -
Prci7g1799 729 MobiDBLite consensus disorder prediction 131 148 - -
Prci7g1799 729 CDD TRX_family 641 721 - -
Prci7g1799 729 Gene3D Glutaredoxin 638 728 - -
Prci7g1799 729 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 726 IPR044534 -
Prci7g1799 729 SUPERFAMILY TPR-like 230 456 IPR011990 GO:0005515
Prci7g1799 729 MobiDBLite consensus disorder prediction 28 148 - -
Prci7g1799 729 Pfam Thioredoxin 646 719 IPR013766 -
Prci7g1799 729 SUPERFAMILY TPR-like 472 584 IPR011990 GO:0005515
Prci7g1799 729 SUPERFAMILY Thioredoxin-like 642 724 IPR036249 -
Prci7g1799 729 MobiDBLite consensus disorder prediction 43 111 - -
Prci7g1799 729 Pfam Tetratricopeptide repeat 502 535 IPR001440 GO:0005515
Prci7g1799 729 ProSiteProfiles TPR repeat profile. 230 263 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 502 535 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 536 569 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 264 297 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 230 263 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 298 332 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 468 501 IPR019734 GO:0005515
Prci7g1799 729 SMART tpr_5 422 455 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1799 Prci-Chr7 32988630 32992980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1799 467 612 U-box Gene Family AT3G07370 28.962 2.63e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1799 - - pcin:129314822 1392.48