LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1741	ATGGACTTTGCGACGTCAAGCTTCAAAGCTGTCTCTGTTTTCTTCTTCTTCAGATTTCTGCTTCTCTGTCTCTTCACAGATTTCCCATCCAACGCTCAAGTTATACCCCAAGACGAAGTGAAGGCTCTACAGGCAATATCTGATAAACTCACCAACGTGAATTGGAAGGTCACGCCAACATCTTGTATCAAAGGAGCTGGATTTAATCTCCTTACCTCGTCCTCTGAAATAACCAGGAATGTCACTTGCGATTGCACTTTCCAAAACGACACCGTTTGCCATGTCACTAATATTGATTTCTCTCTCAACTATCTCAATGGCACAATCCCAACGTCTTTTAGGCGCATCCCTCTTATCACTCTGTCCCTTGTGGGGAATCGCATTAGTGGTTCAATTCCCGTAGAATTGGGTGAAATTGCTAGTTTGATGGATTTGATCCTAGAAGATAATCAGCTTGGAGGACCTCTTCCTCAGAGTCTTGGAAATTTGAACGACTTACGAAAATTACGTCTTTCTGCAAATAATTTTACCGGAAAAATACCAGAAACCTTTGGAAATCTGAAGAACCTAACTGCGTTTTCTATAGATGGGAGCAACTTATCAGGAAAAATACCAAGTTTTATCGGGAACTGGACCAAAATTATGTACATGGATATGGAGGGCACAGGCTTGGAAGGCTCAATTCCTTCCACCATATCGTTGTTGACAAATTTGAAAGAGTTGAGAATATCTGATTTGACTGGATCAACTACCATGACATTTCCTGATCTGACGAATTTGAAGAGTCTGGAACGGCTGGTATTAAGAAATTGCTTAGTTACTGGTCCCATTCCAACGTACATTGGTGAAATAAAAACCTTAAAAACTCTGGACCTGAGTTTTAACAAGTTGACAGGTCCAATTCCCGACTCATTTGAGAACTTGAATTTTAATCACATGTTTCTTACAAACAATTCTCTAAGTGGAGCCGTTCCAGAATGGGTGCTAAAAAACAAATATAACATTGATTTATCTTACAACAATTTTACTGCGGCCTCTACATCAACTTGCCAAGTCTTGGAAGTGAACTTGGCTTCTAGCCTCTCGTCTTCAGCAAGCAATCCACTCTTTTGTTTGAAGAAAGGCCTACCTTGTGCAAGAAAACCTCAATATTATTCGTTATTCATAAATTGTGGGGGGCCCAATATGAAGAATGAGGGGAATGAATATGAAGCAGATCTCAATCAAGACGGCACTTCATTCTTTGAAGAAAAAGACAGTTGGGCTTATAGCAGCACAGGAACATATATTTACAATGATAAAGCTGATTATATAGCGACTCTACCAAGTTTGAAAATGAATGGCTCAGAGTACTACCAAACAGCCCGCCTCAGCCCTTTGTCGCTTAAGTACTATGGCCTATGTATGCTAAAGGGTAATTATAAAGTAAAACTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATTTAGCAGCCTTGGTAGACGCATATTTGATGTTTCAATTCAAGGTTTTAAATACTTGAAAGATTTCAACATCGCGAAGGAAGCTGGTGGAGTTGGTAAAGGCATCATTAGGGAATTCAACGTTGATGTGAATGATACCACCTTGGAGATCCATTTATATTGGGCAGGGAAAGGTACTACTGCAATTCCCCAGAGAGGTGTATATGGACCTCTAATATCTGCTATCACTGTGACTCCAAACTTCAAAGTTCCATCAAAAGGGTTGTCAACTGGAGCTATTGTTGGAATTGTGGTTGCATCATGTGTTTTCTTTGTATTGGTACTCATTGTTCTCCGAAAGAAGGGTTTCCTTGGGAAAGATCCAAAAGACATAGAACTTTTAGATCTTAAGACAGGTTATTTTTCTTTAAGACAAATTAAGCATGCGACCAATAACTTTGACCCGGAGAATAAGATAGGAGAAGGAGGTTTTGGGCCTGTGTATAAGGGTGTGTTATCAGATGGTGTTGTCATCGCTGTTAAGCAGCTCTCTTCCAAGTCAAAGCAAGGAAACCGTGAATTTATTAATGAAATAGGAATGGTATCTGCTTTGCAGCATCCAAATTTTGTGAAGCTTTATGGTTGTTGCATTGAGGGAAATCAGTTGTTGCTTATATATGAATATATGGAGAACAATAGTCTTGCTCGGGCACTTTTTGGTCGTGAAGAACAAAGGATACACTTGGGTTGGCCCACAAGAGTGAAAATTTGTCAAGGGATAGCAAGGGGATTGGCATATCTTCACGAGGAATCAAGATTGAAAATAGTACATAGGGATATTAAGGCAACTAATATCTTGCTTGATAAGGATATGAATGCCAAGATTTCTGACTTCGGTCTAGCAAAGCTCAATGACGATGAGAATACCCATATCAGCACTCGAATAGCTGGAACAATTGGTTACATAGCTCCTGAATATGCAATGAGGGGTTACTTGACGGACAAAGCAGATATTTACAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGCGGAAAGAGCAACACGAGTTACAGACCAAAGGATGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAGGAGCAAGGAAATCTTCTGGAGCTGGTGGATCCACGTCTTGGTTTAAGCTACTCTAAAGATGAGGCCATGAAAATGCTCAACTTGGCTCTCTTGTGCACCAATGCATCTCCCACCCTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGATGGAAAAACTCCAATCCAAGCACCAATAATCAAGCACAAAGATTCAAGCCAGGATTTGGATGCAAGATTCAAATCCTTTGAGATGCTATCATATGACAGCCATGCATCTGTAATCTCTCAAGGAAGTATGGAACACACAGGCAAGTCAATGAATGGGCCGTGGATTGACTGCTCAATATCTTTTCCGAGTAAAGATGATTGTTCTTCTTCTAGTAAGCTTCTTGAAGATTAA	2955	0.4017	MDFATSSFKAVSVFFFFRFLLLCLFTDFPSNAQVIPQDEVKALQAISDKLTNVNWKVTPTSCIKGAGFNLLTSSSEITRNVTCDCTFQNDTVCHVTNIDFSLNYLNGTIPTSFRRIPLITLSLVGNRISGSIPVELGEIASLMDLILEDNQLGGPLPQSLGNLNDLRKLRLSANNFTGKIPETFGNLKNLTAFSIDGSNLSGKIPSFIGNWTKIMYMDMEGTGLEGSIPSTISLLTNLKELRISDLTGSTTMTFPDLTNLKSLERLVLRNCLVTGPIPTYIGEIKTLKTLDLSFNKLTGPIPDSFENLNFNHMFLTNNSLSGAVPEWVLKNKYNIDLSYNNFTAASTSTCQVLEVNLASSLSSSASNPLFCLKKGLPCARKPQYYSLFINCGGPNMKNEGNEYEADLNQDGTSFFEEKDSWAYSSTGTYIYNDKADYIATLPSLKMNGSEYYQTARLSPLSLKYYGLCMLKGNYKVKLHFAEIMFSDDQTFSSLGRRIFDVSIQGFKYLKDFNIAKEAGGVGKGIIREFNVDVNDTTLEIHLYWAGKGTTAIPQRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVVASCVFFVLVLIVLRKKGFLGKDPKDIELLDLKTGYFSLRQIKHATNNFDPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFINEIGMVSALQHPNFVKLYGCCIEGNQLLLIYEYMENNSLARALFGREEQRIHLGWPTRVKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKDMNAKISDFGLAKLNDDENTHISTRIAGTIGYIAPEYAMRGYLTDKADIYSFGVVALEIVSGKSNTSYRPKDEFVYLLDWAYVLQEQGNLLELVDPRLGLSYSKDEAMKMLNLALLCTNASPTLRPSMSSVVSMLDGKTPIQAPIIKHKDSSQDLDARFKSFEMLSYDSHASVISQGSMEHTGKSMNGPWIDCSISFPSKDDCSSSSKLLED	984

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1741	984	Gene3D	Phosphorylase Kinase; domain 1	604	711	-	-
	Prci7g1741	984	Pfam	Protein tyrosine and serine/threonine kinase	639	907	IPR001245	GO:0004672\|GO:0006468
	Prci7g1741	984	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	157	249	-	-
	Prci7g1741	984	Gene3D	Ribonuclease Inhibitor	161	249	IPR032675	-
	Prci7g1741	984	SMART	serkin_6	636	907	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1741	984	Gene3D	Ribonuclease Inhibitor	250	360	IPR032675	-
	Prci7g1741	984	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	384	570	-	-
	Prci7g1741	984	SUPERFAMILY	L domain-like	92	343	-	-
	Prci7g1741	984	Gene3D	Ribonuclease Inhibitor	40	160	IPR032675	-
	Prci7g1741	984	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	758	770	IPR008271	GO:0004672\|GO:0006468
	Prci7g1741	984	SUPERFAMILY	Protein kinase-like (PK-like)	621	928	IPR011009	-
	Prci7g1741	984	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	607	711	-	-
	Prci7g1741	984	Pfam	Malectin domain	386	565	IPR021720	-
	Prci7g1741	984	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	18	937	-	-
	Prci7g1741	984	Gene3D	Transferase(Phosphotransferase) domain 1	712	921	-	-
	Prci7g1741	984	ProSiteProfiles	Protein kinase domain profile.	636	918	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1741	984	CDD	STKc_IRAK	642	909	-	-
	Prci7g1741	984	Gene3D	-	383	570	-	-
	Prci7g1741	984	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	712	919	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1741	Prci-Chr7	32565906	32574450	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1741	15	973	Receptor kinase-like Gene Family	AT1G53440	60.636	0.0	1186

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci7g1741		PK_Tyr_Ser-Thr	8.5e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1741	-		-	gmx:121173337	1337.01