LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1739	ATGGACTTTGCGACGTCAAGCTTCAAAGCTGTCTCTGTTTTCTTCTTCTTCAGATTTCTGCTTCTCTGTCTCTTCACAGATTTCCCATCCAACGCTCAAGTTATACCCCAAGACGAAGTGAAGGCTCTACAGGCAATATCTGATAAACTCACCAACGTGAATTGGAAGGTCACGCCAACATCTTGTATCAAAGGAGCTGGATTTAATCTCCTTACCTCGTCCTCTGAAATAACCAGGAATGTCACTTGCGATTGCACTTTCCAAAACGACACCGTTTGCCATGTCACTAATATCCTGTTGAAAAGCCAAAATATATCAGGAGAAATACCCAGTGAATTTGGAAATCTCACCCATCTGACTGAACTTGATTTCTCTCTCAACTATCTCAATGGCACAATCCCAACGTCTTTTAGGCGCATCCCTCTTATCACTCTGTCCCTTGTGGGGAATCGCATTAGTGGTTCAATTCCCGTAGAATTGGGTGAAATTGCTAGTTTGATGGATTTGATCCTAGAAGATAATCAGCTTGGAGGACCTCTTCCTCAGAGTCTTGGAAATTTGAACGACTTACGAAAATTACGTCTTTCTGCAAATAATTTTACCGGAAAAATACCAGAAACCTTTGGAAATCTGAAGAACCTAACTGCGTTTTCTATAGATGGGAGCAACTTATCAGGAAAAATACCAAGTTTTATCGGGAACTGGACCAAAATTATGTACATGGATATGGAGGGCACAGGCTTGGAAGGCTCAATTCCTTCCACCATATCGTTGTTGACAAATTTGAAAGAGTTGAGAATATCTGATTTGACTGGATCAACTACCATGACATTTCCTGATCTGACGAATTTGAAGAGTCTGGAACGGCTGGTATTAAGAAATTGCTTAGTTACTGGTCCCATTCCAACGTACATTGGTGAAATAAAAACCTTAAAAACTCTGGACCTGAGTTTTAACAAGTTGACAGGTCCAATTCCCGACTCATTTGAGAACTTGAATTTTAATCACATGTTTCTTACAAACAATTCTCTAAGTGGAGCCGTTCCAGAATGGGTGCTAAAAAACAAATATAACATTGATTTATCTTACAACAATTTTACTGCGGCCTCTACATCAACTTGCCAAGTCTTGGAAGTGAACTTGGCTTCTAGCCTCTCGTCTTCAGCAAGCAATCCACTCTTTTGTTTGAAGAAAGGCCTACCTTGTGCAAGAAAACCTCAATATTATTCGTTATTCATAAATTGTGGGGGGCCCAATATGAAGAATGAGGGGAATGAATATGAAGCAGATCTCAATCAAGACGGCACTTCATTCTTTGAAGAAAAAGACAGTTGGGCTTATAGCAGCACAGGAACATATATTTACAATGATAAAGCTGATTATATAGCGACTCTACCAAGTTTGAAAATGAATGGCTCAGAGTACTACCAAACAGCCCGCCTCAGCCCTTTGTCGCTTAAGTACTATGGCCTATGTATGCTAAAGGGTAATTATAAAGTAAAACTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATTTAGCAGCCTTGGTAGACGCATATTTGATGTTTCAATTCAAGGTTTTAAATACTTGAAAGATTTCAACATCGCGAAGGAAGCTGGTGGAGTTGGTAAAGGCATCATTAGGGAATTCAACGTTGATGTGAATGATACCACCTTGGAGATCCATTTATATTGGGCAGGGAAAGGTACTACTGCAATTCCCCAGAGAGGTGTATATGGACCTCTAATATCTGCTATCACTGTGACTCCAAACTTCAAAGTTCCATCAAAAGGGTTGTCAACTGGAGCTATTGTTGGAATTGTGGTTGCATCATGTGTTTTCTTTGTATTGGTACTCATTGTTCTCCGAAAGAAGGGTTTCCTTGGGAAAGATCCAAAAGACATAGAACTTTTAGATCTTAAGACAGGTTATTTTTCTTTAAGACAAATTAAGCATGCGACCAATAACTTTGACCCGGAGAATAAGATAGGAGAAGGAGGTTTTGGGCCTGTGTATAAGGGTGTGTTATCAGATGGTGTTGTCATCGCTGTTAAGCAGCTCTCTTCCAAGTCAAAGCAAGGAAACCGTGAATTTATTAATGAAATAGGAATGGTATCTGCTTTGCAGCATCCAAATTTTGTGAAGCTTTATGGTTGTTGCATTGAGGGAAATCAGTTGTTGCTTATATATGAATATATGGAGAACAATAGTCTTGCTCGGGCACTTTTTGGTCGTGAAGAACAAAGGATACACTTGGGTTGGCCCACAAGAGTGAAAATTTGTCAAGGGATAGCAAGGGGATTGGCATATCTTCACGAGGAATCAAGATTGAAAATAGTACATAGGGATATTAAGGCAACTAATATCTTGCTTGATAAGGATATGAATGCCAAGATTTCTGACTTCGGTCTAGCAAAGCTCAATGACGATGAGAATACCCATATCAGCACTCGAATAGCTGGAACAATTGGTTACATAGCTCCTGAATATGCAATGAGGGGTTACTTGACGGACAAAGCAGATATTTACAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGCGGAAAGAGCAACACGAGTTACAGACCAAAGGATGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAGGAGCAAGGAAATCTTCTGGAGCTGGTGGATCCACGTCTTGGTTTAAGCTACTCTAAAGATGAGGCCATGAAAATGCTCAACTTGGCTCTCTTGTGCACCAATGCATCTCCCACCCTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGATGGAAAAACTCCAATCCAAGCACCAATAATCAAGCACAAAGATTCAAGCCAGGATTTGGATGCAAGATTCAAATCCTTTGAGATGCTATCATATGACAGCCATGCATCTGTAATCTCTCAAGGAAGTATGGAACACACAGGCAAGTCAATGAATGGGCCGTGGATTGACTGCTCAATATCTTTTCCGAGTAAAGATGATTGTTCTTCTTCTAGTAAGCTTCTTGAAGATTAA	3027	0.4014	MDFATSSFKAVSVFFFFRFLLLCLFTDFPSNAQVIPQDEVKALQAISDKLTNVNWKVTPTSCIKGAGFNLLTSSSEITRNVTCDCTFQNDTVCHVTNILLKSQNISGEIPSEFGNLTHLTELDFSLNYLNGTIPTSFRRIPLITLSLVGNRISGSIPVELGEIASLMDLILEDNQLGGPLPQSLGNLNDLRKLRLSANNFTGKIPETFGNLKNLTAFSIDGSNLSGKIPSFIGNWTKIMYMDMEGTGLEGSIPSTISLLTNLKELRISDLTGSTTMTFPDLTNLKSLERLVLRNCLVTGPIPTYIGEIKTLKTLDLSFNKLTGPIPDSFENLNFNHMFLTNNSLSGAVPEWVLKNKYNIDLSYNNFTAASTSTCQVLEVNLASSLSSSASNPLFCLKKGLPCARKPQYYSLFINCGGPNMKNEGNEYEADLNQDGTSFFEEKDSWAYSSTGTYIYNDKADYIATLPSLKMNGSEYYQTARLSPLSLKYYGLCMLKGNYKVKLHFAEIMFSDDQTFSSLGRRIFDVSIQGFKYLKDFNIAKEAGGVGKGIIREFNVDVNDTTLEIHLYWAGKGTTAIPQRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVVASCVFFVLVLIVLRKKGFLGKDPKDIELLDLKTGYFSLRQIKHATNNFDPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFINEIGMVSALQHPNFVKLYGCCIEGNQLLLIYEYMENNSLARALFGREEQRIHLGWPTRVKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKDMNAKISDFGLAKLNDDENTHISTRIAGTIGYIAPEYAMRGYLTDKADIYSFGVVALEIVSGKSNTSYRPKDEFVYLLDWAYVLQEQGNLLELVDPRLGLSYSKDEAMKMLNLALLCTNASPTLRPSMSSVVSMLDGKTPIQAPIIKHKDSSQDLDARFKSFEMLSYDSHASVISQGSMEHTGKSMNGPWIDCSISFPSKDDCSSSSKLLED	1008

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1739	1008	Gene3D	-	407	594	-	-
	Prci7g1739	1008	CDD	STKc_IRAK	666	933	-	-
	Prci7g1739	1008	Gene3D	Ribonuclease Inhibitor	38	202	IPR032675	-
	Prci7g1739	1008	Gene3D	Ribonuclease Inhibitor	203	273	IPR032675	-
	Prci7g1739	1008	ProSiteProfiles	Protein kinase domain profile.	660	942	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1739	1008	Gene3D	Ribonuclease Inhibitor	274	383	IPR032675	-
	Prci7g1739	1008	Gene3D	Phosphorylase Kinase; domain 1	628	735	-	-
	Prci7g1739	1008	Pfam	Protein tyrosine and serine/threonine kinase	663	931	IPR001245	GO:0004672\|GO:0006468
	Prci7g1739	1008	Gene3D	Transferase(Phosphotransferase) domain 1	736	945	-	-
	Prci7g1739	1008	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	408	594	-	-
	Prci7g1739	1008	SUPERFAMILY	L domain-like	86	367	-	-
	Prci7g1739	1008	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	736	943	-	-
	Prci7g1739	1008	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	18	961	-	-
	Prci7g1739	1008	SMART	serkin_6	660	931	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1739	1008	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	782	794	IPR008271	GO:0004672\|GO:0006468
	Prci7g1739	1008	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	631	735	-	-
	Prci7g1739	1008	SUPERFAMILY	Protein kinase-like (PK-like)	645	952	IPR011009	-
	Prci7g1739	1008	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g53420	36	271	-	-
	Prci7g1739	1008	Pfam	Malectin domain	410	589	IPR021720	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1739	Prci-Chr7	32565906	32574450	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1739	15	997	Receptor kinase-like Gene Family	AT1G53440	62.028	0.0	1227

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci7g1739		PK_Tyr_Ser-Thr	8.9e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1739	-		-	gmx:100817368	1381.7