LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1738	ATGGGGCTCCTTGAATCATCTTGTCAACGTTTCCCTTATTGGAAATCGACTAACCGGCCCAATCCCAGCGGAGATTGGAAATCTCATCAGTCTCAGAAGCATGGTTTTGGAGTTCAATCAATTATCTGGACACCTACCCCCGGAGCTTGGGAATGTTTCCCAGATTCGAAGACTGTAAGGACTCTGTTTGATTTTCTATTCAGGTTTCTTACTTCCAACAATTTTTCTGGGGAAATACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTTCTGGAAAGATACCCAGTTTTATTGGAAGCTGGACGAGTCTAGTAAAACTGGTGATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCCTCAGAAATTTCGTTTCTGCATGACATGACTGACTTGAGAATCAGTGACTTGAATGGACCTGATTCCACATTTCCACAACTTGCTAGGATGACAGGATTGAAAACACTGATATTAAGGAGTTGCAATATCACTGGAACATTACCTGAATATCTTGGAACAATGACCAGTATAAAATCCTTAGACCTCAGCTTTAACAAATTAACTGGACAAATTCCAAGCACCTATGCTGGCTTAAGAAAAGCAGGACACGTATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAACGTTCTGGCTTTGTCATGTGTTTCAGAGACTACATTCTGAATTACATTTTATACCTTGTGCATAGAGATCTTTCATACAACAACTTCAGCGTTGGAAAACCAGGACAGCTAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACTTCGACAGGAAATGACTCGGGAACAGTTCCATGTTTGAGAGGCTTTCACTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGTGGCCAGCAATTAACACAGAACGGAGGTACAACATTTGAAGAAGATTCAGATGGATCAGGATCAGCAAGATTTGATCAGAGTGAGACAAATTGGATAATGAGCAGCACAGGTTACTTCTTGGATAAAGAACGAATAGATTACTATACCGTGCGAAGTGCATCTGCACTCTCTATGACCAATGCTGAATTATACATGGATGCACGTGTTTCTCCGCTCTCCGTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGACGATAAAACGTATAGCAGCCTCGGCAGGCGCGTATTTGATGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCGGGAGGAGTTGGTAAGGCAGTCATCAAAGAATTCACTGGTATTGTGACTGGGAATTCATTGGAGATCCGCCTCTATTGGGCCGGGAAAGGGACAACTGCTATTCCATATAAATCACTTTATGGTCCACTTATATCAGCTATATCTGTGGATCCTGCAGACTTTAAACCCCCATCAGAAAATGGAAGTAGCATATCTGGAGGGACGGTGGCTGGCATTGTGGTCACTGGAGCAGCTATTGTAATCCTGGTATTTGGCGTACTTTGGTGGAGAGGCAGCCTAGGACCCAAAAATTCATTGGCAAGAGAGCTAAAGAGTTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCGGCGACAAACAACTTTGATGTTGCCAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGTTTTCTGTCAGATGGCACCGTGATTGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAACAAGGAATTTATAAATGAGATAGGCATGATTTCTGCCATGCAACATCCTTGTCTTGTTAAACTTTATGGCTGTTGTGTTGAGAGAGATCAGTTGTTGCTGGTATATGAATACATGGATAACAATAGTCTCGCTCGTGCTTTATTTGGCCAAGAAGGTGGATTGCATTTAGACTGGCCAACAAGATACAGGATTTGTATTGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGACTGAAGATTGTTCATAGGGACATTAAAGCCACGAATGTATTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAACTTTATGAAGAGGACAATAGCCATGTCAGCACTAGAATAGCCGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGTCATCTAAGTGACAAGACAGATGTTTATAGTTTTGGAATTGTTGCACTGGAAATTGTTAGCGGCAGGAGCAACAACATGAACCATAGCATCCATCTTCTTGAATGGGCACATTTCTTAAAGGAAAACGACAATCTAATGGAGATAGTTGATCCAAAGTTGAAATCATCGAAGTATATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTCTTATGCACAAACGTGACTGCATCACTCAGGCCCACCATGTCATCAGTGGTAAGCATGCTTGAAGACAGAACTGTTCGGGAGGTGGATTCAGATGCAAGTGAGGTATTGGATGAGATGAAGATGCGGAAGTATTACCCAAATATAGGGAAAAATAGCATTTCAGTGGAGGAGGGGTCATGTGTTGATTCACCTACATCAGTTACGGATCTCTATCCTGTTCACTTGGATTCCTCTTACTGGATGAAAAGAAATTAG	2682	0.4169	MGLLESSCQRFPYWKSTNRPNPSGDWKSHQSQKHGFGVQSIIWTPTPGAWECFPDSKTVRTLFDFLFRFLTSNNFSGEIPATFARLTRLIDFRIGGNQFSGKIPSFIGSWTSLVKLVIQGSGLSGPIPSEISFLHDMTDLRISDLNGPDSTFPQLARMTGLKTLILRSCNITGTLPEYLGTMTSIKSLDLSFNKLTGQIPSTYAGLRKAGHVYLTGNLLSGPVPEWVERSGFVMCFRDYILNYILYLVHRDLSYNNFSVGKPGQLTCKTGNVNLFSSTSTGNDSGTVPCLRGFHCPKTWYSLHINCGGQQLTQNGGTTFEEDSDGSGSARFDQSETNWIMSSTGYFLDKERIDYYTVRSASALSMTNAELYMDARVSPLSVSYFAFCMGNGNYTVKLHFAEIMFTDDKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVIKEFTGIVTGNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVDPADFKPPSENGSSISGGTVAGIVVTGAAIVILVFGVLWWRGSLGPKNSLARELKSLDLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTVIAVKQLSSKSKQGNKEFINEIGMISAMQHPCLVKLYGCCVERDQLLLVYEYMDNNSLARALFGQEGGLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNSHVSTRIAGTYGYMAPEYAMHGHLSDKTDVYSFGIVALEIVSGRSNNMNHSIHLLEWAHFLKENDNLMEIVDPKLKSSKYIKAEAMVMINVAFLCTNVTASLRPTMSSVVSMLEDRTVREVDSDASEVLDEMKMRKYYPNIGKNSISVEEGSCVDSPTSVTDLYPVHLDSSYWMKRN	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1738	893	Gene3D	Transferase(Phosphotransferase) domain 1	638	852	-	-
	Prci7g1738	893	SUPERFAMILY	Protein kinase-like (PK-like)	546	830	IPR011009	-
	Prci7g1738	893	ProSiteProfiles	Protein kinase domain profile.	562	834	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1738	893	SUPERFAMILY	L domain-like	70	259	-	-
	Prci7g1738	893	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	531	637	-	-
	Prci7g1738	893	Pfam	Malectin domain	301	484	IPR021720	-
	Prci7g1738	893	Gene3D	Ribonuclease Inhibitor	56	281	IPR032675	-
	Prci7g1738	893	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	638	840	-	-
	Prci7g1738	893	SMART	serkin_6	562	834	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1738	893	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	299	489	-	-
	Prci7g1738	893	Pfam	Protein kinase domain	563	826	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1738	893	Gene3D	-	299	488	-	-
	Prci7g1738	893	Gene3D	Phosphorylase Kinase; domain 1	532	637	-	-
	Prci7g1738	893	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	79	146	-	-
	Prci7g1738	893	Pfam	Leucine rich repeat	160	219	IPR001611	GO:0005515
	Prci7g1738	893	CDD	STKc_IRAK	568	830	-	-
	Prci7g1738	893	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	70	850	-	-
	Prci7g1738	893	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	683	695	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1738	Prci-Chr7	32546645	32556767	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1738	69	859	Receptor kinase-like Gene Family	AT1G53420	56.328	0.0	882

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci7g1738		Pkinase	7.3e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1738	-		-	qsa:O6P43_001072	1074.31