LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci7g1736	ATGATCTTACTGGTCTTTAATTTCTTGATCTATTTACCTACTGTTAATATGAGGTTGCCTCAGCAGTTCTTCATCCTTTCGCTCCTCACAGTTTGGTTGACATCTTTTGCTTCTGCAACAAATCTACCGGACGATGAAGTGCAAGCGCTGAAAGATATAGCGAAGACGTTGGGGAAGAAGGATTGGAATTTCCAAGTAGATCCATGCAGCGGAGGAAATGGATGGCTAACTCCAAATCCTGTTCGTGGCGACGAAAATAATGTCACCTGTGTCTGTTCTTTTCTCCACGATAATAATGCCACTGTCTGCCACGTCACTAACATACTCCTGAAAGGGCAAAATCTTCAAGGCACGCTCCCTCGTGAACTGGTGAGGTTGCCCTATCTTCAAGAAATCGATCTCTCTCGCAATTACCTGAACGGCACAATCCCTAAAGAATGGGGCTCCTTGAATCATCTTGTCAACGTTTCCCTTATTGGAAATCGACTAACCGGCCCAATCCCAGCGGAGATTGGAAATCTCATCAGTCTCAGAAGCATGGTTTTGGAGTTCAATCAATTATCTGGACACCTACCCCCGGAGCTTGGGAATGTTTCCCAGATTCGAAGACTGTTTCTTACTTCCAACAATTTTTCTGGGGAAATACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTTCTGGAAAGATACCCAGTTTTATTGGAAGCTGGACGAGTCTAGTAAAACTGGTGATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCCTCAGAAATTTCGTTTCTGCATGACATGACTGACTTGAGAATCAGTGACTTGAATGGACCTGATTCCACATTTCCACAACTTGCTAGGATGACAGGATTGAAAACACTGATATTAAGGAGTTGCAATATCACTGGAACATTACCTGAATATCTTGGAACAATGACCAGTATAAAATCCTTAGACCTCAGCTTTAACAAATTAACTGGACAAATTCCAAGCACCTATGCTGGCTTAAGAAAAGCAGGACACGTATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAACGTTCTGGCTTTGTCATGTGTTTCAGAGACTACATTCTGAATTACATTTTATACCTTGTGCATAGAGATCTTTCATACAACAACTTCAGCGTTGGAAAACCAGGACAGCTAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACTTCGACAGGAAATGACTCGGGAACAGTTCCATGTTTGAGAGGCTTTCACTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGTGGCCAGCAATTAACACAGAACGGAGGTACAACATTTGAAGAAGATTCAGATGGATCAGGATCAGCAAGATTTGATCAGAGTGAGACAAATTGGATAATGAGCAGCACAGGTTACTTCTTGGATAAAGAACGAATAGATTACTATACCGTGCGAAGTGCATCTGCACTCTCTATGACCAATGCTGAATTATACATGGATGCACGTGTTTCTCCGCTCTCCGTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGACGATAAAACGTATAGCAGCCTCGGCAGGCGCGTATTTGATGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCGGGAGGAGTTGGTAAGGCAGTCATCAAAGAATTCACTGGTATTGTGACTGGGAATTCATTGGAGATCCGCCTCTATTGGGCCGGGAAAGGGACAACTGCTATTCCATATAAATCACTTTATGGTCCACTTATATCAGCTATATCTGTGGATCCTGACTTTAAACCCCCATCAGAAAATGGAAGTAGCATATCTGGAGGGACGGTGGCTGGCATTGTGGTCACTGGAGCAGCTATTGTAATCCTGGTATTTGGCGTACTTTGGTGGAGAGGCAGCCTAGGACCCAAAAATTCATTGGCAAGAGAGCTAAAGAGTTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCGGCGACAAACAACTTTGATGTTGCCAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGTTTTCTGTCAGATGGCACCGTGATTGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAACAAGGAATTTATAAATGAGATAGGCATGATTTCTGCCATGCAACATCCTTGTCTTGTTAAACTTTATGGCTGTTGTGTTGAGAGAGATCAGTTGTTGCTGGTATATGAATACATGGATAACAATAGTCTCGCTCGTGCTTTATTTGGCCAAGAAGGTGGATTGCATTTAGACTGGCCAACAAGATACAGGATTTGTATTGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGACTGAAGATTGTTCATAGGGACATTAAAGCCACGAATGTATTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAACTTTATGAAGAGGACAATAGCCATGTCAGCACTAGAATAGCCGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGTCATCTAAGTGACAAGACAGATGTTTATAGTTTTGGAATTGTTGCACTGGAAATTGTTAGCGGCAGGAGCAACAACATGAACCATAGCATCCATCTTCTTGAATGGGCACATTTCTTAAAGGAAAACGACAATCTAATGGAGATAGTTGATCCAAAGTTGAAATCATCGAAGTATATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTCTTATGCACAAACGTGACTGCATCACTCAGGCCCACCATGTCATCAGTGGTAAGCATGCTTGAAGACAGAACTGTTCGGGAGGTGGATTCAGATGCAAGTGAGGTATTGGATGAGATGAAGATGCGGAAGTATTACCCAAATATAGGGAAAAATAGCATTTCAGTGGAGGAGGGGTCATGTGTTGATTCACCTACATCAGTTACGGATCTCTATCCTGTTCACTTGGATTCCTCTTACTGGATGAAAAGAAATTAG	3087	0.4211	MILLVFNFLIYLPTVNMRLPQQFFILSLLTVWLTSFASATNLPDDEVQALKDIAKTLGKKDWNFQVDPCSGGNGWLTPNPVRGDENNVTCVCSFLHDNNATVCHVTNILLKGQNLQGTLPRELVRLPYLQEIDLSRNYLNGTIPKEWGSLNHLVNVSLIGNRLTGPIPAEIGNLISLRSMVLEFNQLSGHLPPELGNVSQIRRLFLTSNNFSGEIPATFARLTRLIDFRIGGNQFSGKIPSFIGSWTSLVKLVIQGSGLSGPIPSEISFLHDMTDLRISDLNGPDSTFPQLARMTGLKTLILRSCNITGTLPEYLGTMTSIKSLDLSFNKLTGQIPSTYAGLRKAGHVYLTGNLLSGPVPEWVERSGFVMCFRDYILNYILYLVHRDLSYNNFSVGKPGQLTCKTGNVNLFSSTSTGNDSGTVPCLRGFHCPKTWYSLHINCGGQQLTQNGGTTFEEDSDGSGSARFDQSETNWIMSSTGYFLDKERIDYYTVRSASALSMTNAELYMDARVSPLSVSYFAFCMGNGNYTVKLHFAEIMFTDDKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVIKEFTGIVTGNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVDPDFKPPSENGSSISGGTVAGIVVTGAAIVILVFGVLWWRGSLGPKNSLARELKSLDLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTVIAVKQLSSKSKQGNKEFINEIGMISAMQHPCLVKLYGCCVERDQLLLVYEYMDNNSLARALFGQEGGLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNSHVSTRIAGTYGYMAPEYAMHGHLSDKTDVYSFGIVALEIVSGRSNNMNHSIHLLEWAHFLKENDNLMEIVDPKLKSSKYIKAEAMVMINVAFLCTNVTASLRPTMSSVVSMLEDRTVREVDSDASEVLDEMKMRKYYPNIGKNSISVEEGSCVDSPTSVTDLYPVHLDSSYWMKRN	1028

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci7g1736	1028	Gene3D	-	435	624	-	-
	Prci7g1736	1028	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	435	625	-	-
	Prci7g1736	1028	SMART	serkin_6	697	969	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1736	1028	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	818	830	IPR008271	GO:0004672\|GO:0006468
	Prci7g1736	1028	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	773	975	-	-
	Prci7g1736	1028	Pfam	Malectin domain	437	620	IPR021720	-
	Prci7g1736	1028	SUPERFAMILY	Protein kinase-like (PK-like)	681	965	IPR011009	-
	Prci7g1736	1028	ProSiteProfiles	Protein kinase domain profile.	697	969	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1736	1028	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	25	985	-	-
	Prci7g1736	1028	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	666	772	-	-
	Prci7g1736	1028	Gene3D	Ribonuclease Inhibitor	45	216	IPR032675	-
	Prci7g1736	1028	SUPERFAMILY	L domain-like	99	361	-	-
	Prci7g1736	1028	Pfam	Protein kinase domain	698	961	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci7g1736	1028	Gene3D	Ribonuclease Inhibitor	217	272	IPR032675	-
	Prci7g1736	1028	Gene3D	Transferase(Phosphotransferase) domain 1	773	987	-	-
	Prci7g1736	1028	CDD	STKc_IRAK	703	965	-	-
	Prci7g1736	1028	Gene3D	Phosphorylase Kinase; domain 1	667	772	-	-
	Prci7g1736	1028	Gene3D	Ribonuclease Inhibitor	273	408	IPR032675	-
	Prci7g1736	1028	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g53420	43	282	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci7g1736	Prci-Chr7	32546645	32556767	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci7g1736	33	994	Receptor kinase-like Gene Family	AT1G53420	55.250	0.0	1028

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Prci7g1736		Pkinase	9.5e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci7g1736	-		-	qsa:O6P43_001072	1300.42