Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1734 ATGATCTTACTGGTCTTTAATTTCTTGATCTATTTACCTACTGTTAATATGAGGTTGCCTCAGCAGTTCTTCATCCTTTCGCTCCTCACAGTTTGGTTGACATCTTTTGCTTCTGCAACAAATCTACCGGACGATGAAGTGCAAGCGCTGAAAGATATAGCGAAGACGTTGGGGAAGAAGGATTGGAATTTCCAAGTAGATCCATGCAGCGGAGGAAATGGATGGCTAACTCCAAATCCTGTTCGTGGCGACGAAAATAATGTCACCTGTGTCTGTTCTTTTCTCCACGATAATAATGCCACTGTCTGCCACGTCACTAACATACTCCTGAAAGGGCAAAATCTTCAAGGCACGCTCCCTCGTGAACTGGTGAGGTTGCCCTATCTTCAAGAAATCGATCTCTCTCGCAATTACCTGAACGGCACAATCCCTAAAGAATGGGGCTCCTTGAATCATCTTGTCAACGTTTCCCTTATTGGAAATCGACTAACCGGCCCAATCCCAGCGGAGATTGGAAATCTCATCAGTCTCAGAAGCATGGTTTTGGAGTTCAATCAATTATCTGGACACCTACCCCCGGAGCTTGGGAATGTTTCCCAGATTCGAAGACTGTTTCTTACTTCCAACAATTTTTCTGGGGAAATACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTTCTGGAAAGATACCCAGTTTTATTGGAAGCTGGACGAGTCTAGTAAAACTGGTGATCCAAGGGAGTGGTTTGAGTGGGCCAATTCCCTCAGAAATTTCGTTTCTGCATGACATGACTGACTTGAGAATCAGTGACTTGAATGGACCTGATTCCACATTTCCACAACTTGCTAGGATGACAGGATTGAAAACACTGATATTAAGGAGTTGCAATATCACTGGAACATTACCTGAATATCTTGGAACAATGACCAGTATAAAATCCTTAGACCTCAGCTTTAACAAATTAACTGGACAAATTCCAAGCACCTATGCTGGCTTAAGAAAAGCAGGACACGTATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAACGTTCTGGCTTTGTAGATCTTTCATACAACAACTTCAGCGTTGGAAAACCAGGACAGCTAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACTTCGACAGGAAATGACTCGGGAACAGTTCCATGTTTGAGAGGCTTTCACTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGTGGCCAGCAATTAACACAGAACGGAGGTACAACATTTGAAGAAGATTCAGATGGATCAGGATCAGCAAGATTTGATCAGAGTGAGACAAATTGGATAATGAGCAGCACAGGTTACTTCTTGGATAAAGAACGAATAGATTACTATACCGTGCGAAGTGCATCTGCACTCTCTATGACCAATGCTGAATTATACATGGATGCACGTGTTTCTCCGCTCTCCGTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGACGATAAAACGTATAGCAGCCTCGGCAGGCGCGTATTTGATGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCGGGAGGAGTTGGTAAGGCAGTCATCAAAGAATTCACTGGTATTGTGACTGGGAATTCATTGGAGATCCGCCTCTATTGGGCCGGGAAAGGGACAACTGCTATTCCATATAAATCACTTTATGGTCCACTTATATCAGCTATATCTGTGGATCCTGACTTTAAACCCCCATCAGAAAATGGAAGTAGCATATCTGGAGGGACGGTGGCTGGCATTGTGGTCACTGGAGCAGCTATTGTAATCCTGGTATTTGGCGTACTTTGGTGGAGAGGCAGCCTAGGACCCAAAAATTCATTGGCAAGAGAGCTAAAGAGTTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCGGCGACAAACAACTTTGATGTTGCCAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGTTTTCTGTCAGATGGCACCGTGATTGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAACAAGGAATTTATAAATGAGATAGGCATGATTTCTGCCATGCAACATCCTTGTCTTGTTAAACTTTATGGCTGTTGTGTTGAGAGAGATCAGTTGTTGCTGGTATATGAATACATGGATAACAATAGTCTCGCTCGTGCTTTATTTGGCCAAGAAGGTGGATTGCATTTAGACTGGCCAACAAGATACAGGATTTGTATTGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGACTGAAGATTGTTCATAGGGACATTAAAGCCACGAATGTATTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAACTTTATGAAGAGGACAATAGCCATGTCAGCACTAGAATAGCCGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGTCATCTAAGTGACAAGACAGATGTTTATAGTTTTGGAATTGTTGCACTGGAAATTGTTAGCGGCAGGAGCAACAACATGAACCATAGCATCCATCTTCTTGAATGGGCACATTTCTTAAAGGAAAACGACAATCTAATGGAGATAGTTGATCCAAAGTTGAAATCATCGAAGTATATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTCTTATGCACAAACGTGACTGCATCACTCAGGCCCACCATGTCATCAGTGGTAAGCATGCTTGAAGACAGAACTGTTCGGGAGGTGGATTCAGATGCAAGTGAGGTATTGGATGAGATGAAGATGCGGAAGTATTACCCAAATATAGGGAAAAATAGCATTTCAGTGGAGGAGGGGTCATGTGTTGATTCACCTACATCAGTTACGGATCTCTATCCTGTTCACTTGGATTCCTCTTACTGGATGAAAAGAAATTAG 3036 0.4226 MILLVFNFLIYLPTVNMRLPQQFFILSLLTVWLTSFASATNLPDDEVQALKDIAKTLGKKDWNFQVDPCSGGNGWLTPNPVRGDENNVTCVCSFLHDNNATVCHVTNILLKGQNLQGTLPRELVRLPYLQEIDLSRNYLNGTIPKEWGSLNHLVNVSLIGNRLTGPIPAEIGNLISLRSMVLEFNQLSGHLPPELGNVSQIRRLFLTSNNFSGEIPATFARLTRLIDFRIGGNQFSGKIPSFIGSWTSLVKLVIQGSGLSGPIPSEISFLHDMTDLRISDLNGPDSTFPQLARMTGLKTLILRSCNITGTLPEYLGTMTSIKSLDLSFNKLTGQIPSTYAGLRKAGHVYLTGNLLSGPVPEWVERSGFVDLSYNNFSVGKPGQLTCKTGNVNLFSSTSTGNDSGTVPCLRGFHCPKTWYSLHINCGGQQLTQNGGTTFEEDSDGSGSARFDQSETNWIMSSTGYFLDKERIDYYTVRSASALSMTNAELYMDARVSPLSVSYFAFCMGNGNYTVKLHFAEIMFTDDKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVIKEFTGIVTGNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVDPDFKPPSENGSSISGGTVAGIVVTGAAIVILVFGVLWWRGSLGPKNSLARELKSLDLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTVIAVKQLSSKSKQGNKEFINEIGMISAMQHPCLVKLYGCCVERDQLLLVYEYMDNNSLARALFGQEGGLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNSHVSTRIAGTYGYMAPEYAMHGHLSDKTDVYSFGIVALEIVSGRSNNMNHSIHLLEWAHFLKENDNLMEIVDPKLKSSKYIKAEAMVMINVAFLCTNVTASLRPTMSSVVSMLEDRTVREVDSDASEVLDEMKMRKYYPNIGKNSISVEEGSCVDSPTSVTDLYPVHLDSSYWMKRN 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1734 1011 Gene3D - 418 607 - -
Prci7g1734 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 418 608 - -
Prci7g1734 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Prci7g1734 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 756 958 - -
Prci7g1734 1011 SUPERFAMILY L domain-like 99 361 - -
Prci7g1734 1011 SMART serkin_6 680 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1734 1011 Gene3D Ribonuclease Inhibitor 85 404 IPR032675 -
Prci7g1734 1011 Gene3D Transferase(Phosphotransferase) domain 1 756 970 - -
Prci7g1734 1011 ProSiteProfiles Protein kinase domain profile. 680 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1734 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 968 - -
Prci7g1734 1011 SUPERFAMILY Protein kinase-like (PK-like) 664 948 IPR011009 -
Prci7g1734 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 649 755 - -
Prci7g1734 1011 Pfam Malectin domain 420 603 IPR021720 -
Prci7g1734 1011 Gene3D Phosphorylase Kinase; domain 1 650 755 - -
Prci7g1734 1011 Pfam Protein kinase domain 681 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1734 1011 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 43 282 - -
Prci7g1734 1011 CDD STKc_IRAK 686 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1734 Prci-Chr7 32546645 32556767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1734 33 977 Receptor kinase-like Gene Family AT1G53420 56.017 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1734 Pkinase 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1734 - - gmx:732563 1308.89