Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1708 ATGCCTGGGAATAAGTATAACGGTGCCTCGCATGTACAATACCTGGAGGGAGGAACTGCACGGTTGCTTAGTGAGGGATGTGAAAGACAAGAGGGGAGGCCTTATAGACAACGACTTTTGGTGGTGGCTAACAGGCTGCCAGTCTCTGCAGTTAGGAGGGGCGAAGACTCATGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTAGCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGATGGATAGGATGGGCTGGTGTCAATGTGCCTGACGAGATTGGACAGAAGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGCATTCCGGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGCTACTGCAACAACATCTTGTGGCCGCTTTTTCATTACCTTGGACTACCCCAAGAAGAACGCCTTGCTACCACACGGAGCTTTCAGTCTCAGTTTGCAGCATACAAGAAAGCGAACCAGATGTTTGCTGATGTCGTGAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGTCATGACTACCATCTTATGTTTCTTCCAAAATGTTTAAAGGAATATAACAGTAAAATGAAAGTTGGCTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCATAGGACATTACCGTCACGTTCAGAGCTCCTTCATGCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGAACTCCTGAAGGGGTTGAGGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCTGATCGATTCAGGCGTGCACTTGAGCTTACTCAAGTGAAGGATCATATCAAAGAATTAGAAGAAAGATTTGAGGGTAGAAAGGTAATGCTAGGTGTTGATCGTCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTAGCATTTGAAAATTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACGAGAACAGATGTTCCTGAGTATCAGAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGAACATTAACTGCTGTTCCTATACATCACTTGGACCGGTCACTTGATTTTCATGCACTGTGTGCTTTATATGCTGTTACTGATGTTGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGCGCTGCACAATCTCTAGGTGCAGGAGCAATTCTGGTTAACCCCTGGAACATAACAGAAGTTGCCGCTGCAATTGCACAGGCTCTGAATATGTCACCTGGGGAAAGAGAGAAACGTCATAAGCACAATTATGTACATGTAACGACCCACACTGCTCAAGAATGGGCGGAGACTTTTGTGAGTGAACTTAATGATACTGTGGTTGAGGCACAATTAAGGACAAGACAAGTTCCACCTCCACTTCCAACCAAGACTACAATTGACCGCTATCTGCAGTCAACTAATCGATTGCTCATATTGGGATTCAATGCAACTTTAACTGAACCAGTCGAAAAGAAAGGCGATCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAATTAAAACAACCGTTGACAGCACTTTGTGATGACCCGAAGACCACAATTGTTGTGCTCAGTGGAAGTGGTCGAAGTGTCCTATATAATAACTTCAAGGAATACAACATGTGGCTAGCAGCAGAGAACGGTATGTTCTTACGCCCTGCGAAGGGAGAATGGATGACAACGATGCCGGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACCCCCCGGTCCCATTTTGATTTTGAAGAAAGGGAAACCTCGCTTGTATGGAACTACAAATATGCAGATGTTGAGTTTGGGAGACTTCAAGCAAGGGATATGTTGCAGCATCTCTGGACCGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAAGTGCGAGCTGTTGGTGTTACGAAGGGAGCAGCTATTGACCGCATCTTAGGTGAGATAGTTCACAGCAAATCCATGATAGCACCAATCGATTATGTTCTATGTATAGGACATTTTCTGTCAAAGCAGGATGAAGATGTTTATTCCTTCTTCGAGCCGGAGCTTCCTTCGGGTGGCGTGGGTGTTGCACGAGCCAAGGCGTCAGAAGCGGTTAAGTTTCCTGCCGAGAGACGATCCTCTCTGAAAATCCCAACTAATACCAAAAGTGGAACAAAATCATCTCAAAATAAGGCACAACGGCTAGTGTCAAATTCTGAGAAGAAAACAACAAACCATATCTGTAATGCACCCAGGAGGCCAGCACCTGAGAAAATCTCATGGAATGTGCTTGACCTCAAGAAGGAGAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGGTATACGCTTGGATCCTCGGATGATGTTGTTTCTTTTCTCAAGGAACTGGCTCAGGCTTCTTCTCCAAACTATTCATCAACGAATTAA 2643 0.4408 MPGNKYNGASHVQYLEGGTARLLSEGCERQEGRPYRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEERLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALELTQVKDHIKELEERFEGRKVMLGVDRLDMIKGIPQKILAFENFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMSPGEREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKTTIDRYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKQPLTALCDDPKTTIVVLSGSGRSVLYNNFKEYNMWLAAENGMFLRPAKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMIAPIDYVLCIGHFLSKQDEDVYSFFEPELPSGGVGVARAKASEAVKFPAERRSSLKIPTNTKSGTKSSQNKAQRLVSNSEKKTTNHICNAPRRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVSFLKELAQASSPNYSSTN 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1708 880 Pfam Trehalose-phosphatase 558 770 IPR003337 GO:0003824|GO:0005992
Prci7g1708 880 Gene3D - 625 707 - -
Prci7g1708 880 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 38 503 IPR012766 GO:0003825|GO:0005992
Prci7g1708 880 Pfam Glycosyltransferase family 20 38 503 IPR001830 GO:0003824|GO:0005992
Prci7g1708 880 FunFam Alpha,alpha-trehalose-phosphate synthase 559 630 - -
Prci7g1708 880 Gene3D - 559 740 IPR023214 -
Prci7g1708 880 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 285 487 - -
Prci7g1708 880 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 30 284 - -
Prci7g1708 880 MobiDBLite consensus disorder prediction 785 813 - -
Prci7g1708 880 Gene3D Glycogen Phosphorylase B; 280 487 - -
Prci7g1708 880 Gene3D Glycogen Phosphorylase B; 28 277 - -
Prci7g1708 880 SUPERFAMILY HAD-like 535 869 IPR036412 -
Prci7g1708 880 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 33 870 IPR001830 GO:0003824|GO:0005992
Prci7g1708 880 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 625 707 - -
Prci7g1708 880 MobiDBLite consensus disorder prediction 785 820 - -
Prci7g1708 880 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 37 506 - -
Prci7g1708 880 CDD HAD_TPP 536 756 - -
Prci7g1708 880 CDD GT20_TPS 38 503 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1708 Prci-Chr7 32425999 32437381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1708 13 873 Trehalose Biosynthesis Gene Families AT1G78580 82.460 0.0 1466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1708 K16055 - qsa:O6P43_029237 1556.96