Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1687 ATGAGCAAGTCTCTGGTTTTAGCCTTTTACATCACCATATGCTGCATCTCTTTTGTCATTTCCAAGATCATCATCTCAATTCTCCTCTACAAAAGATGGAAGAGGAAGCACATGGTTTATGACGGAGTTTATCCAGGTGGGAAGATGGTGATATTTAGGTGTTCAGTGGTTCAATCTCTGACATCTGATGTGGTTTTAAAGAAGACATTGAAACTGAGCAACAAGGACATTATTGGATCTGGTGGGTATGGGACAGTTTATAGACTGCAAATAGATGACTCCACAGCCTTTGCAGTGAAAAGACTCAGCAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGGAGCAATGGCAGACATAAAACACCGCAATATTGTGACTCTTCACGGTTACTATACTGCCCCTCACTACAACTTTCTCATATATGAGCTCATGCCTCATGGAAGCTTGGATTCCTTTCTACATGGAAGATCAAAGAACAAGTTGTTTCTGGATTGGCCAACAAGGTACAGAATAGCCATAGGTGCTGCCAGGGGAATATCATATCTTCACCATGATTGCATACCTCACATTATCCACAGGGATATCAAGTCAAGTAATATATTGCTGGATCACAGCATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACCTTAATGGAACCGAACAAAACTCATGTTACAACCATTGTGGCTGGCACTTTCGGATACTTAGCCCCTGAATATTTTGATACGGGAAGAGCAACTGTAAAAGGGGATGTTTACAGCTTTGGAGTTGTATTATTGGAGCTTTTAACTGGGAAGAAACCCACTGATGAATCATTTATAGAGGAAGGAACCAAGCTTGTCACGTGGGTGAAGGCTGTAGTTCAAGAGAAGAAGGAGGATCTAGTTCTTGACAATACCTTAGGGTCTTGTCCCATGCAAGAGGTAGACAATGTGTTCGACGTTGCAATGATGTGTCTTGAACCAAATCCTCTCAAGAGACCAACCATGGCTGAGGTTGTCACCTTACTGGAGCAAACATGCCCTCACAAACTTGTTAAATCTCCCTCCTGA 1068 0.426 MSKSLVLAFYITICCISFVISKIIISILLYKRWKRKHMVYDGVYPGGKMVIFRCSVVQSLTSDVVLKKTLKLSNKDIIGSGGYGTVYRLQIDDSTAFAVKRLSKGTADRERGFERELGAMADIKHRNIVTLHGYYTAPHYNFLIYELMPHGSLDSFLHGRSKNKLFLDWPTRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDHSMEARVSDFGLATLMEPNKTHVTTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPTDESFIEEGTKLVTWVKAVVQEKKEDLVLDNTLGSCPMQEVDNVFDVAMMCLEPNPLKRPTMAEVVTLLEQTCPHKLVKSPS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1687 355 Gene3D Transferase(Phosphotransferase) domain 1 148 352 - -
Prci7g1687 355 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1687 355 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1687 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Prci7g1687 355 Gene3D Phosphorylase Kinase; domain 1 45 147 - -
Prci7g1687 355 SUPERFAMILY Protein kinase-like (PK-like) 59 343 IPR011009 -
Prci7g1687 355 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Prci7g1687 355 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1687 355 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 353 - -
Prci7g1687 355 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 343 - -
Prci7g1687 355 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1687 Prci-Chr7 32325365 32329305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1687 3 347 Receptor kinase-like Gene Family AT2G35620 46.591 2.24e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Prci7g1687 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1687 - - qsa:O6P43_001114 563.533