Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1686 ATGAGCAAGTCTCTGGTTTTAGCCTTTTACATCACCATATGCTGCATCTCTTTTGTCATTTCCAAGATCATCATCTCAATTCTCCTCTACAAAAGATGGAAGAGGAAGCACATGGTTTATGACGGAGTTTATCCAGGTATAGCAGGAAAAGTAATCATGATTGTCAGTCTGGATTCCCTGAGAAGTGGGAAGATGGTGATATTTAGGTGTTCAGTGGTTCAATCTCTGACATCTGATGTGGTTTTAAAGAAGACATTGAAACTGAGCAACAAGGACATTATTGGATCTGGTGGGTATGGGACAGTTTATAGACTGCAAATAGATGACTCCACAGCCTTTGCAGTGAAAAGACTCAGCAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGGAGCAATGGCAGACATAAAACACCGCAATATTGTGACTCTTCACGGTTACTATACTGCCCCTCACTACAACTTTCTCATATATGAGCTCATGCCTCATGGAAGCTTGGATTCCTTTCTACATGGAAGATCAAAGAACAAGTTGTTTCTGGATTGGCCAACAAGGTACAGAATAGCCATAGGTGCTGCCAGGGGAATATCATATCTTCACCATGATTGCATACCTCACATTATCCACAGGGATATCAAGTCAAGTAATATATTGCTGGATCACAGCATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACCTTAATGGAACCGAACAAAACTCATGTTACAACCATTGTGGCTGGCACTTTCGGATACTTAGCCCCTGAATATTTTGATACGGGAAGAGCAACTGTAAAAGGGGATGTTTACAGCTTTGGAGTTGTATTATTGGAGCTTTTAACTGGGAAGAAACCCACTGATGAATCATTTATAGAGGAAGGAACCAAGCTTGTCACGTGGGTGAAGGCTGTAGTTCAAGAGAAGAAGGAGGATCTAGTTCTTGACAATACCTTAGGGTCTTGTCCCATGCAAGAGGTAGACAATGTGTTCGACGTTGCAATGATGTGTCTTGAACCAAATCCTCTCAAGAGACCAACCATGGCTGAGGTTGTCACCTTACTGGAGCAAACATGCCCTCACAAACTTGTTAAATCTCCCTCCTGA 1116 0.4247 MSKSLVLAFYITICCISFVISKIIISILLYKRWKRKHMVYDGVYPGIAGKVIMIVSLDSLRSGKMVIFRCSVVQSLTSDVVLKKTLKLSNKDIIGSGGYGTVYRLQIDDSTAFAVKRLSKGTADRERGFERELGAMADIKHRNIVTLHGYYTAPHYNFLIYELMPHGSLDSFLHGRSKNKLFLDWPTRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDHSMEARVSDFGLATLMEPNKTHVTTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPTDESFIEEGTKLVTWVKAVVQEKKEDLVLDNTLGSCPMQEVDNVFDVAMMCLEPNPLKRPTMAEVVTLLEQTCPHKLVKSPS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1686 371 Gene3D Phosphorylase Kinase; domain 1 38 163 - -
Prci7g1686 371 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 11 359 - -
Prci7g1686 371 Pfam Protein kinase domain 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1686 371 FunFam Receptor-like serine/threonine-protein kinase 59 163 - -
Prci7g1686 371 SUPERFAMILY Protein kinase-like (PK-like) 71 359 IPR011009 -
Prci7g1686 371 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 164 369 - -
Prci7g1686 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Prci7g1686 371 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Prci7g1686 371 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Prci7g1686 371 SMART serkin_6 88 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1686 371 ProSiteProfiles Protein kinase domain profile. 88 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1686 Prci-Chr7 32325365 32329309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1686 77 363 Receptor kinase-like Gene Family AT2G35620 51.203 3.12e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Prci7g1686 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1686 - - qsa:O6P43_001114 555.829