Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1681 ATGGGATTGCTGAGTTACATAGCACAATGGAGAGGGATCATGAAGGAAGTGGTGGATCGCTCAGCGATTACAGTGAAGTTCCTCTGCCTCCTCCACGTTACCAACAACTATCTTTGCTCCCCTACTCACGTGTATGGGCCTAGCATGCTCCCCACCATGAATCTCACCGGTGACGTGCTACTCACCGAGCACGTGTCTCCTCGAATGGGGAAGCTTGGGCCTGGAGATTTGGTGCTGGTTCGCTCTCCCTTGAACCCTAATCGGACTTTGACCAAGCGCATTGTGGGCATGGAAGGGGATAGGATCACTTACTTTGATCCTAGGCACGGTGATGTAGCTCAAACTGCTGTGGTGCCGAAGGGGCATGTTTGGATTCAAGGGGATAACTTCTATGCCTCCCGTGATTCACGGCATTATGGTCCTATTCCATATGGTCTCATTCAAGGAAAAATCTTTTTTAGGGTTTGGCCACCTGATTGTTTTGGAAAGCTGGATTATTGA 501 0.497 MGLLSYIAQWRGIMKEVVDRSAITVKFLCLLHVTNNYLCSPTHVYGPSMLPTMNLTGDVLLTEHVSPRMGKLGPGDLVLVRSPLNPNRTLTKRIVGMEGDRITYFDPRHGDVAQTAVVPKGHVWIQGDNFYASRDSRHYGPIPYGLIQGKIFFRVWPPDCFGKLDY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1681 166 Gene3D Umud Fragment, subunit A 34 163 - -
Prci7g1681 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 164 - -
Prci7g1681 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci7g1681 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci7g1681 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci7g1681 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Prci7g1681 166 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016020
Prci7g1681 166 Pfam Signal peptidase, peptidase S26 23 105 IPR019533 GO:0004252|GO:0006465
Prci7g1681 166 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Prci7g1681 166 CDD S26_SPase_I 40 151 IPR019533 GO:0004252|GO:0006465
Prci7g1681 166 FunFam Inner membrane protease subunit 1 35 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1681 Prci-Chr7 32299220 32302319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1681 49 164 MADS-box Gene Family AT1G29960 53.846 2.23e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1681 K09647 - cave:132173278 273.478