Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1587 ATGTATCGCTTGATTGTTCTTCGAGACGCTGACCCTTCCCAGTTCGATGGTTCAATCAGGAAGGTTAGATCTTCAGTTATACGAGATCCTGAAATTGATGAAGAATTATCAGGTGTTCACAATGTTATTCTTTATACCTACAAAGAACTAAGTACTGCCACTGAGGATTTCAGTCCAGCGAACAAAATTGGAGAGGGAGGCTTCGGTTCTGTCTATAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCAGCTGAATCAAGACAAGGGGTGCAGGAATTCTTGACAGAGATCAAAGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGTTATATGGCTGTTGTGTGGAAGGAAATCACAGAATATTAGTTTACAATTACCTCGAGAATAACAGTCTTGCACAAACTCTTCTAGGTGGACGTCAAAGCAATATTTTCTTCAATTGGCAAACACGATCTAGAATATGCATTGGGATTGCCCGTGGACTTGCTTTTCTTCATGAGGAAGTAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTTCTTGACAAAGAACTTACACCAAAGATTTCAGATTTTGGACTTGCAAAGCTTATCCCACCAAACATGACTCATGTCAGTACACGTGTGGCAGGGACAATAGGTTATTTGGCACCAGAATATGCAGTCAGGGGGCAGGTGAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGCGGGAGATGCAATACAAATACACGATTACCAGAAGAAGAACAGTTCCTGCTAGAAAGAACATGGAGATATTATCAGCAAAGGATATTGGTAGGGCTGGTAGACACATCACTCAATGGAGAATTCGACGCTGAGGAAGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGCACTCAGGAAGTTCCGAAACTCCGGCCACCCATGTCTTCAGTGGTTAAGATGCTCACGGGAAAAATGGATGTCGACGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTAATGGACCTCAAAGTTAAAGGAAAACCAAAAAATGAAGTTGATATGAAGACATTGTCTTCATATAATGCATCCTCGTCCTCGGACTTCCGGGACACTACAATGTCGTCGGCTGCTTCAACGGTTGCTACTACAACCTCTGCCGTGCGATATGATCATAGCATGTAA 1209 0.4119 MYRLIVLRDADPSQFDGSIRKVRSSVIRDPEIDEELSGVHNVILYTYKELSTATEDFSPANKIGEGGFGSVYKGKLKDGKIAAIKVLAAESRQGVQEFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGRQSNIFFNWQTRSRICIGIARGLAFLHEEVRPHIVHRDIKASNILLDKELTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGRCNTNTRLPEEEQFLLERTWRYYQQRILVGLVDTSLNGEFDAEEACKFLKVGLLCTQEVPKLRPPMSSVVKMLTGKMDVDDSKITEPGLISDLMDLKVKGKPKNEVDMKTLSSYNASSSSDFRDTTMSSAASTVATTTSAVRYDHSM 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1587 402 FunFam cold-responsive protein kinase 1 133 344 - -
Prci7g1587 402 Gene3D Phosphorylase Kinase; domain 1 21 132 - -
Prci7g1587 402 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Prci7g1587 402 CDD STKc_IRAK 63 330 - -
Prci7g1587 402 SUPERFAMILY Protein kinase-like (PK-like) 37 329 IPR011009 -
Prci7g1587 402 Pfam Protein kinase domain 60 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1587 402 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 368 - -
Prci7g1587 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Prci7g1587 402 SMART serkin_6 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1587 402 Gene3D Transferase(Phosphotransferase) domain 1 133 341 - -
Prci7g1587 402 FunFam cold-responsive protein kinase 1 28 132 - -
Prci7g1587 402 ProSiteProfiles Protein kinase domain profile. 57 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1587 Prci-Chr7 31678955 31682411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1587 33 334 Receptor kinase-like Gene Family AT1G53430 57.096 1.43e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1587 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1587 - - pcin:129315125 786.178