Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1585 ATGACTTCTTGTTTTTCTTCCTTATTTGGTAGGAAGGTTAGATCTTCAGTTATACGAGATCCTGAAATTGATGAAGAATTATCAGGTGTTCACAATGTTATTCTTTATACCTACAAAGAACTAAGTACTGCCACTGAGGATTTCAGTCCAGCGAACAAAATTGGAGAGGGAGGCTTCGGTTCTGTCTATAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCAGCTGAATCAAGACAAGGGGTGCAGGAATTCTTGACAGAGATCAAAGTGATCTCAGAAATAGAGCATGAAAATTTAGTTAAGTTATATGGCTGTTGTGTGGAAGGAAATCACAGAATATTAGTTTACAATTACCTCGAGAATAACAGTCTTGCACAAACTCTTCTAGGTGGACGTCAAAGCAATATTTTCTTCAATTGGCAAACACGATCTAGAATATGCATTGGGATTGCCCGTGGACTTGCTTTTCTTCATGAGGAAGTAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTTCTTGACAAAGAACTTACACCAAAGATTTCAGATTTTGGACTTGCAAAGCTTATCCCACCAAACATGACTCATGTCAGTACACGTGTGGCAGGGACAATAGGTTATTTGGCACCAGAATATGCAGTCAGGGGGCAGGTGAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGCGGGAGATGCAATACAAATACACGATTACCAGAAGAAGAACAGTTCCTGCTAGAAAGAACATGGAGATATTATCAGCAAAGGATATTGGTAGGGCTGGTAGACACATCACTCAATGGAGAATTCGACGCTGAGGAAGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGCACTCAGGAAGTTCCGAAACTCCGGCCACCCATGTCTTCAGTGGTTAAGATGCTCACGGGAAAAATGGATGTCGACGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTAATGGACCTCAAAGTTAAAGGAAAACCAAAAAATGAAGTTGATATGAAGACATTGTCTTCATATAATGCATCCTCGTCCTCGGACTTCCGGGACACTACAATGTCGTCGGCTGCTTCAACGGTTGCTACTACAACCTCTGCCGTGCGATATGATCATAGCATGTAA 1182 0.4061 MTSCFSSLFGRKVRSSVIRDPEIDEELSGVHNVILYTYKELSTATEDFSPANKIGEGGFGSVYKGKLKDGKIAAIKVLAAESRQGVQEFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGGRQSNIFFNWQTRSRICIGIARGLAFLHEEVRPHIVHRDIKASNILLDKELTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGRCNTNTRLPEEEQFLLERTWRYYQQRILVGLVDTSLNGEFDAEEACKFLKVGLLCTQEVPKLRPPMSSVVKMLTGKMDVDDSKITEPGLISDLMDLKVKGKPKNEVDMKTLSSYNASSSSDFRDTTMSSAASTVATTTSAVRYDHSM 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1585 393 SUPERFAMILY Protein kinase-like (PK-like) 28 320 IPR011009 -
Prci7g1585 393 CDD STKc_IRAK 54 321 - -
Prci7g1585 393 FunFam cold-responsive protein kinase 1 124 335 - -
Prci7g1585 393 FunFam cold-responsive protein kinase 1 19 123 - -
Prci7g1585 393 SMART serkin_6 48 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1585 393 Gene3D Phosphorylase Kinase; domain 1 13 123 - -
Prci7g1585 393 ProSiteProfiles Protein kinase domain profile. 48 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g1585 393 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Prci7g1585 393 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Prci7g1585 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Prci7g1585 393 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 33 359 - -
Prci7g1585 393 Pfam Protein kinase domain 51 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1585 Prci-Chr7 31678023 31682411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1585 24 325 Receptor kinase-like Gene Family AT1G53430 57.096 7.60e-113 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci7g1585 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1585 - - pcin:129315125 749.199