Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1580 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTGTGTGATTACTTAATGAAGAAGGTGACTCACTGTGACTCCTCTCTGATGATTGATGTTGATCTTAACAAATGCGAACCATGGGACATCCCTGAGGCAGCATGTGTAGGTGGGAAGGAGTGGTATTTCTACACACAGCGAGACCGCAAGTATGCCACAGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACGGGGAAGGACAGGCCTATCCTTCGCAAGGGCACCCTTGTTGGCATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCCCCTAAACTTTCTTCAGCCAAGGAGGACTGGGTTCTGTGCAGGGCGTTCCTCAAGGACAGAGAACCTTCAGCGAAACAGAGCATGGGAAGCTACTACGACGAGACAGGCTCTTCATCTCTACCTGCATTAATGGATTCTTACATTAGTTTCGAACAACAGGCTCGAGCTCAAACTCATCAAGACGATTACGAGCAAGTGCCCTGCTTCTCCATATTCTCGCAAATCCAAACAAACCCTAGCTTCAACCACACAAGCAGTACGAGCATTATAGATCCAAATTTGTTGGTACCTGTCAAGAACCACAATGTGACGACCACATACGGCGGAGGAACGACGCCGTATGATCTGGATTCTTCTTGCTTGGACCCTAATTTGAATTTGGCTGGTGATAGTAGAAAGGTATTGAAAGCTTTTGTGGATCAGCTCACCATGATTGAGAGAAATCAACAAAACCAAATTAGTACTCTCAAAGGTTCACCGAGCTTAGGGGAAGCAAGTCCTGAGAGTTTCTTATCTGATGTGTGTATGCCCAGCTTATGGAACAATTTCTGA 972 0.4774 MSSISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFLKDREPSAKQSMGSYYDETGSSSLPALMDSYISFEQQARAQTHQDDYEQVPCFSIFSQIQTNPSFNHTSSTSIIDPNLLVPVKNHNVTTTYGGGTTPYDLDSSCLDPNLNLAGDSRKVLKAFVDQLTMIERNQQNQISTLKGSPSLGEASPESFLSDVCMPSLWNNF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1580 323 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Prci7g1580 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 216 - -
Prci7g1580 323 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Prci7g1580 323 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Prci7g1580 323 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Prci7g1580 323 FunFam NAC domain-containing protein 100-like 20 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1580 Prci-Chr7 31637624 31641836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1580 2 321 NAC Transcription Factor Family AT1G56010 58.434 3.56e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1580 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1580 - - ahf:112703413 462.225