Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1579 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTGTGTGATTACTTAATGAAGAAGGTGACTCACTGTGACTCCTCTCTGATGATTGATGTTGATCTTAACAAATGCGAACCATGGGACATCCCTGCATGTGTAGGTGGGAAGGAGTGGTATTTCTACACACAGCGAGACCGCAAGTATGCCACAGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACGGGGAAGGACAGGCCTATCCTTCGCAAGGGCACCCTTGTTGGCATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCCCCTAAACTTTCTTCAGCCAAGGAGGACTGGGTTCTGTGCAGGGCGTTCCTCAAGGACAGAGAACCTTCAGCGAAACAGAGCATGGGAAGCTACTACGACGAGACAGGCTCTTCATCTCTACCTGCATTAATGGATTCTTACATTAGTTTCGAACAACAGGCTCGAGCTCAAACTCATCAAGACGATTACGAGCAAGTGCCCTGCTTCTCCATATTCTCGCAAATCCAAACAAACCCTAGCTTCAACCACACAAGCAGTACGAGCATTATAGATCCAAATTTGTTGGTACCTGTCAAGAACCACAATGTGACGACCACATACGGCGGAGGAACGACGCCGTATGATCTGGATTCTTCTTGCTTGGACCCTAATTTGAATTTGGCTGGTGATAGTAGAAAGGTATTGAAAGCTTTTGTGGATCAGCTCACCATGATTGAGAGAAATCAACAAAACCAAATTAGTACTCTCAAAGGTTCACCGAGCTTAGGGGAAGCAAGTCCTGAGAGTTTCTTATCTGATGTGTGTATGCCCAGCTTATGGAACAATTTCTGA 966 0.4762 MSSISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFLKDREPSAKQSMGSYYDETGSSSLPALMDSYISFEQQARAQTHQDDYEQVPCFSIFSQIQTNPSFNHTSSTSIIDPNLLVPVKNHNVTTTYGGGTTPYDLDSSCLDPNLNLAGDSRKVLKAFVDQLTMIERNQQNQISTLKGSPSLGEASPESFLSDVCMPSLWNNF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1579 321 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 214 - -
Prci7g1579 321 Gene3D NAC domain 20 160 IPR036093 GO:0003677|GO:0006355
Prci7g1579 321 ProSiteProfiles NAC domain profile. 11 156 IPR003441 GO:0003677|GO:0006355
Prci7g1579 321 SUPERFAMILY NAC domain 2 156 IPR036093 GO:0003677|GO:0006355
Prci7g1579 321 Pfam No apical meristem (NAM) protein 12 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1579 Prci-Chr7 31637622 31641836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g1579 2 319 NAC Transcription Factor Family AT1G56010 58.434 4.64e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g1579 NAM 6.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1579 - - ahf:112703413 455.292